RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MAGEB18Q96M61 343 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 NOL4LQ96MY1 436 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 RHOJQ9H4E5 214 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 ECT2Q9H8V3 914 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 PDFQ9HBH1 243 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 AGPAT5Q9NUQ2 364 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 TMEM9Q9P0T7 183 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 ACTR3BQ9P1U1 418 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 GALPQ9UBC7 116 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 PDE10AQ9Y233 779 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 PPIAL4AQ9Y536 164 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 TNRQ92752 1358 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 WWP2O00308 870 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 HDAC3O15379 428 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 DUX1O43812 170 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 LANCL1O43813 399 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 SCGB2A1O75556 95 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 OR4F21O95013 312 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 CD55P08174 381 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 THRBP10828 461 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 BCKDHAP12694 445 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 ADRA1AP35348 466 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 TRPC1P48995 793 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 VLDLRP98155 873 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 BCL2L1Q07817 233 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 INAQ16352 499 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 OR8G2PQ6IF36 304 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 MOB1BQ7L9L4 216 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 CATSPER4Q7RTX7 472 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 GCNT2Q8N0V5 402 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 ZSCAN4Q8NAM6 433 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 CNIH3Q8TBE1 160 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 TRUB1Q8WWH5 349 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 PSMG2Q969U7 264 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 NMUR2Q9GZQ4 415 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 Q9H3A6 140 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 COG4Q9H9E3 785 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 POLD4Q9HCU8 107 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 RDH8Q9NYR8 311 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 LRRK1Q38SD2 2015 aa2.85□□□□□ -1.95
TOPBP1-204ENST00000505804 F8WDY8 70 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CHADO15335 359 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 MBD3O95983 291 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 PSMB1P20618 241 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CYP2F1P24903 491 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 ADORA2BP29275 332 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 MAGEA5P43359 124 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 DHPSP49366 369 aaPredicted RBP2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 NAPAP54920 295 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 RND3P61587 244 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 NTHL1P78549 312 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 MRPS11P82912 194 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 RGS1Q08116 209 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 ST3GAL3Q11203 375 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 PDZK1IP1Q13113 114 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CHI3L2Q15782 390 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF311Q5JNZ3 666 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 WSCD1Q658N2 575 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CENPUQ71F23 418 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 SERPINA9Q86WD7 417 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 M1APQ8TC57 530 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 HAVCR1Q96D42 359 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 C16orf74Q96GX8 76 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 VPS35Q96QK1 796 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 FEM1AQ9BSK4 669 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 FICDQ9BVA6 458 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CCSER1Q9C0I3 900 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 RWDD1Q9H446 243 aaPredicted RBP2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CAB39LQ9H9S4 337 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 ANKMY1Q9P2S6 941 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CRLS1Q9UJA2 301 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 SAMD4AQ9UPU9 718 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 CHMP2BQ9UQN3 213 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 RNF6Q9Y252 685 aa2.84□□□□□ -1.95
TOPBP1-204ENST00000505804 DHRS7CA6NNS2 312 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 C19orf81C9J6K1 198 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 K7ENP7 123 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 GPX5O75715 221 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 CABYRO75952 493 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 TRIM16O95361 564 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 IGHV3-23P01764 117 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 CPN1P15169 458 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 ATP5A1P25705 553 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 BDKRB1P46663 353 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 RPL29P47914 159 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 STARP49675 285 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 RIPPLY3P57055 190 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 BPIFB3P59826 476 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 KYAT1Q16773 422 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 LINC01620Q4KN68 170 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 OR2B11Q5JQS5 317 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 C12orf60Q5U649 245 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 PVRIGQ6DKI7 326 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 OR5M10Q6IEU7 315 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 NIPAL3Q6P499 406 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 ARSKQ6UWY0 536 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 CXCL17Q6UXB2 119 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 FRA10AC1Q70Z53 315 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 KRTAP11-1Q8IUC1 163 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 C14orf178Q8N769 122 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms