RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TRDV1A0A1B0GX56 115 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 TRABD2BA6NFA1 517 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 HMGN4O00479 90 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 CCL16O15467 120 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 F12P00748 615 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 PCBP3P57721 371 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 OR12D2P58182 307 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 FKBP1BP68106 108 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 RPE65Q16518 533 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 SLC36A2Q495M3 483 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 SPIN4Q56A73 249 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 CCDC116Q8IYX3 515 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 OR5M3Q8NGP4 307 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 OR4Q3Q8NH05 313 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 CD99L2Q8TCZ2 262 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 DNAJA3Q96EY1 480 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ZC3HAV1LQ96H79 300 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 C12orf57Q99622 126 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ALG8Q9BVK2 526 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF416Q9BWM5 594 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 POLDIP3Q9BY77 421 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 SUV39H2Q9H5I1 410 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 HINT3Q9NQE9 182 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 MRPL17Q9NRX2 175 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 HPF1Q9NWY4 346 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 NTMQ9P121 344 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 DYRK1BQ9Y463 629 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 KIAA0100Q14667 2235 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 DSPPQ9NZW4 1301 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 KCNAB3O43448 404 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 RNF13O43567 381 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 TRIM3O75382 744 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 SOX30O94993 753 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 LIPCP11150 499 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 F8A1P23610 371 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 GDNFP39905 211 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 PSMB10P40306 273 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 GDI2P50395 445 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 TAP2Q03519 686 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ELAVL2Q12926 359 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 CAMK1Q14012 370 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 DUSP6Q16828 381 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 GGTA1PQ4G0N0 100 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 TP53I3Q53FA7 332 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ARSIQ5FYB1 569 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 OTPQ5XKR4 325 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 GRHL2Q6ISB3 625 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 APOOLQ6UXV4 268 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 NDUFAF7Q7L592 441 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 TTLQ8NG68 377 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 OR2AP1Q8NGE2 309 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 POP5Q969H6 163 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF354BQ96LW1 612 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 CASD1Q96PB1 797 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 HHIPQ96QV1 700 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 USB1Q9BQ65 265 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 BHLHE41Q9C0J9 482 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 C20orf85Q9H1P6 137 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 LIN7BQ9HAP6 207 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF334Q9HCZ1 680 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 EMC7Q9NPA0 242 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ERVK-19Q9WJR5 959 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 HELZP42694 1942 aaKnown RBP7.13□□□□□ -1.27
NEDD9-208ENST00000504387 ALPK3Q96L96 1907 aa7.13□□□□□ -1.27
NEDD9-208ENST00000504387 FAM171A2A8MVW0 826 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 H7BY64 318 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SGK494L7N484 410 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 KHNYNO15037 678 aaKnown RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 LRG1P02750 347 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SELPP16109 830 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NPPBP16860 134 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 MAPK9P45984 424 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 AP1S1P61966 158 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 RAB40BQ12829 278 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ETFDHQ16134 617 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OCLNQ16625 522 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 GPR33Q49SQ1 333 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 EOGTQ5NDL2 527 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 VASNQ6EMK4 673 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SLCO4C1Q6ZQN7 724 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 MSANTD1Q6ZTZ1 278 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 PAQR7Q86WK9 346 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ADGRG3Q86Y34 549 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NPAS4Q8IUM7 802 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 LINC00518Q8N0U6 118 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 HDDC3Q8N4P3 179 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 RFLNBQ8N5W9 214 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF614Q8N883 585 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OR5M1Q8NGP8 315 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OR8K3Q8NH51 312 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OR51A7Q8NH64 312 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM255BQ8WV15 326 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 KIAA1143Q96AT1 154 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 RAD51AP1Q96B01 352 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 PLD4Q96BZ4 506 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 PRAP1Q96NZ9 151 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF607Q96SK3 696 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SOSTQ9BQB4 213 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms