RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TUBBP07437 444 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 DANCRP0C864 163 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 UROSP10746 265 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 PRPS2P11908 318 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 CHN1P15882 459 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 DDX5P17844 614 aaKnown RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 GCAP28676 217 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 NTSP30990 170 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 KCNJ5P48544 419 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 SERPINB4P48594 390 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 NCBP2P52298 156 aaKnown RBP eCLIP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 SUMO3P55854 103 aaPredicted RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 DNAJB13P59910 316 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC7A5Q01650 507 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 C2orf80Q0P641 193 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 PDE7AQ13946 482 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 P2RY6Q15077 328 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 CCDC153Q494R4 210 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 TCHHL1Q5QJ38 904 aaPredicted RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 AP1ARQ63HQ0 302 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 APOOLQ6UXV4 268 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 RPS27LQ71UM5 84 aaKnown RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 CXXC5Q7LFL8 322 aaKnown RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 UBQLNLQ8IYU4 475 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 GABRG1Q8N1C3 465 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 NATD1Q8N6N6 113 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 OR10D3Q8NH80 312 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 PSMA8Q8TAA3 256 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 RNF128Q8TEB7 428 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 HSD17B8Q92506 261 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 CPNE4Q96A23 557 aaPredicted RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 MRRFQ96E11 262 aaKnown RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 GIMAP5Q96F15 307 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 ZBED6CLQ96FA7 236 aaPredicted RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 HS3ST6Q96QI5 342 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 HBEGFQ99075 208 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 STACQ99469 402 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 RTN4RQ9BZR6 473 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 HOXD1Q9GZZ0 328 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 GSTO2Q9H4Y5 243 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 PPCSQ9HAB8 311 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 UBTD1Q9HAC8 227 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 TIGARQ9NQ88 270 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 UBQLN4Q9NRR5 601 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 DUSP22Q9NRW4 184 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 MED11Q9P086 117 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 DMGDHQ9UI17 866 aaKnown RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 TMED5Q9Y3A6 229 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 CCL27Q9Y4X3 112 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 CR1P17927 2039 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 YLPM1P49750 1951 aaKnown RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 A0A1W2PRB8 838 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 POC1B-GALNT4F8VUJ3 575 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 G3V2L1 256 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 H0YC42 278 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 EIF1AYO14602 144 aaKnown RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 SEC14L5O43304 696 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 NDUFB5O43674 189 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 DNAJA2O60884 412 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 GLRA3O75311 464 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 UTS2O95399 124 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 SYNGR4O95473 234 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 OXSR1O95747 527 aaPredicted RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PLGP00747 810 aaPredicted RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 FESP07332 822 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 GUSBP08236 651 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 FGF4P08620 206 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 LINGO3P0C6S8 592 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TSPAN8P19075 237 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 ME2P23368 584 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 AGTR1P30556 359 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 GABRA3P34903 492 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 THBS2P35442 1172 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 IDUAP35475 653 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 RPL3P39023 403 aaKnown RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 ASMTP46597 345 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 EIF1AXP47813 144 aaKnown RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 HTR6P50406 440 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TPD52P55327 224 aaPredicted RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 CTBP2P56545 445 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 RPS4XP62701 263 aaKnown RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 KRTAP1-1Q07627 177 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF155Q12901 538 aaPredicted RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PRSS53Q2L4Q9 553 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PLPPR5Q32ZL2 321 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 GRAMD1BQ3KR37 738 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC25A53Q5H9E4 307 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 NCMAPQ5T1S8 102 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 SFRP5Q5T4F7 317 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 NOXRED1Q6NXP6 359 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM107Q6UX40 140 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PLXDC2Q6UX71 529 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 LRIG3Q6UXM1 1119 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 SYT10Q6XYQ8 523 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 FRMD7Q6ZUT3 714 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 Q71RC1 249 aaPredicted RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF550Q7Z398 422 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 GALNT10Q86SR1 603 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 MARCH3Q86UD3 253 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 P2RY8Q86VZ1 359 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms