RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 IPPKQ9H8X2 491 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ANKRA2Q9H9E1 313 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 CXorf21Q9HAI6 301 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 NMRAL1Q9HBL8 299 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PFDN4Q9NQP4 134 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 LYARQ9NX58 379 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 KLHL28Q9NXS3 571 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 NINQ8N4C6 2090 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 FAM159BA6NKW6 160 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 E7ESA3 106 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 TP73O15350 636 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ZSCAN12O43309 604 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GMFGO60234 142 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 KERAO60938 352 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ICOSLGO75144 302 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 NDUFS7O75251 213 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 UGT2B11O75310 529 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 REM1O75628 298 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PPM1BO75688 479 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 RCBTB2O95199 551 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PLAUP00749 431 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 CD3EP07766 207 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ABCB1P08183 1280 aaPredicted RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 LTA4HP09960 611 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 MTHFD2P13995 350 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 TCP1P17987 556 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 TSPAN8P19075 237 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 IGFBP5P24593 272 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 SERPINB1P30740 379 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GCKP35557 465 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PTGDSP41222 190 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 MC3RP41968 323 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PIK3CBP42338 1070 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PAFAH1B1P43034 410 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 KCNJ5P48544 419 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ALDH9A1P49189 494 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 TMED10P49755 219 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 RPS6KA3P51812 740 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 CASP9P55211 416 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GNG11P61952 73 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 MRPS35P82673 323 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 DUSP2Q05923 314 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 CALCOCO2Q13137 446 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 BIKQ13323 160 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GTF2H2Q13888 395 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 E2F2Q14209 437 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 LTB4RQ15722 352 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 NHSL2Q5HYW2 709 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 CDKL4Q5MAI5 379 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 FAM120AOSQ5T036 256 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 CCNYL2Q5T2Q4 361 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GRTP1Q5TC63 336 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 MROH9Q5TGP6 573 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 LIPJQ5W064 366 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 MRM1Q6IN84 353 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GTF2H2CQ6P1K8 395 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 VWA1Q6PCB0 445 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ENPP6Q6UWR7 440 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 RPS27LQ71UM5 84 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GOLGA7Q7Z5G4 137 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 GRAMD2AQ8IUY3 354 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 C7orf57Q8NEG2 295 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 OR52R1Q8NGF1 315 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 OR5M1Q8NGP8 315 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ZPLD1Q8TCW7 415 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 HGDQ93099 445 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 UBXN10Q96LJ8 280 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 SFXN2Q96NB2 322 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 MRPL1Q9BYD6 325 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 OPN3Q9H1Y3 402 aaPredicted RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 VPS11Q9H270 941 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 SLCO5A1Q9H2Y9 848 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 NOL11Q9H8H0 719 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 DDX31Q9H8H2 851 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 CALHM2Q9HA72 323 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PSD3Q9NYI0 1048 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 RNF14Q9UBS8 474 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ZMAT5Q9UDW3 170 aaKnown RBP4.97□□□□□ -1.61
SPTA1-209ENST00000498708 NDRG3Q9UGV2 375 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 DKKL1Q9UK85 242 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 FBXL2Q9UKC9 423 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 ACOT9Q9Y305 439 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PLLPQ9Y342 182 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PMF1-BGLAPU3KQ54 211 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 MED12LQ86YW9 2145 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 PRR14LQ5THK1 2151 aa4.97□□□□□ -1.61
SPTA1-209ENST00000498708 IGHV4-30-2A0A087WSY4 118 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 A0A1W2PNV4 684 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 PRAMEF25A6NGN4 478 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 SYCE1LA8MT33 242 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 H0YC42 278 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 PLOD2O00469 737 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 UBFD1O14562 309 aaKnown RBP4.96□□□□□ -1.62
SPTA1-209ENST00000498708 SEC14L5O43304 696 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 RAD51CO43502 376 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 TCF21O43680 179 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 SCO2O43819 266 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 LMX1BO60663 402 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 CBR3O75828 277 aa4.96□□□□□ -1.62
SPTA1-209ENST00000498708 VENTXO95231 258 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms