RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PAQR5Q9NXK6 330 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-212ENST00000498540 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 STOML1Q9UBI4 398 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 GDF2Q9UK05 429 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-212ENST00000498540 MRTO4Q9UKD2 239 aaKnown RBP13.1□□□□□ -0.31
TRAF4-212ENST00000498540 CADP27708 2225 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 A0A0J9YW62 118 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 A0A1W2PP18 115 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 A8MV72 311 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-212ENST00000498540 PHF1O43189 567 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-212ENST00000498540 SUPT7LO94864 414 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 INHBAP08476 426 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 ANXA4P09525 319 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-212ENST00000498540 COL6A2P12110 1019 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 HMOX2P30519 316 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 PHBP35232 272 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 PSMD4P55036 377 aaKnown RBP13.09□□□□□ -0.31
TRAF4-212ENST00000498540 ZNHIT3Q15649 155 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-212ENST00000498540 TAB1Q15750 504 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 PLPPR5Q32ZL2 321 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 ZNF672Q499Z4 452 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-212ENST00000498540 HBMQ6B0K9 141 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 FIGNL1Q6PIW4 674 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 SEZ6L2Q6UXD5 910 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 TFAP2EQ6VUC0 442 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 GPRIN3Q6ZVF9 776 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 GABRG1Q8N1C3 465 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 METTL6Q8TCB7 284 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 PIK3R3Q92569 461 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 ELP4Q96EB1 424 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 RNF145Q96MT1 663 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 SHCBP1LQ9BZQ2 653 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
TRAF4-212ENST00000498540 A0A087WZY1 265 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 A0A1W2PRB8 838 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 GPRIN2O60269 458 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 SLITRK5O94991 958 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 GABRA3P34903 492 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 RAC1P63000 192 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 BSPH1Q075Z2 132 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 ZNF763Q0D2J5 394 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 C2orf80Q0P641 193 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 ZNF678Q5SXM1 525 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 TEX35Q5T0J7 233 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 ESPNLQ6ZVH7 1005 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 NUFIP2Q7Z417 695 aaKnown RBP13.08□□□□□ -0.32
TRAF4-212ENST00000498540 EXOC3L1Q86VI1 746 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 POC1BQ8TC44 478 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 ABHD3Q8WU67 409 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 ROBO4Q8WZ75 1007 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 AMDHD1Q96NU7 426 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 KCNA7Q96RP8 456 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 PAFAH2Q99487 392 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 ESRP2Q9H6T0 727 aaKnown RBP13.08□□□□□ -0.32
TRAF4-212ENST00000498540 EQTNQ9NQ60 294 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 MIEF1Q9NQG6 463 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 MED17Q9NVC6 651 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 TIMM22Q9Y584 194 aa13.08□□□□□ -0.32
TRAF4-212ENST00000498540 C7orf72A4D263 438 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 ALG1L2C9J202 215 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 KCNH1O95259 989 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 OXSR1O95747 527 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-212ENST00000498540 CD8AP01732 235 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 C8BP07358 591 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 IL32P24001 234 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 ADH6P28332 368 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 SHC1P29353 583 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 NTSP30990 170 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 GSTM5P46439 218 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 SLC7A5Q01650 507 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 SLC18A2Q05940 514 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 ZNF239Q16600 458 aaKnown RBP13.07□□□□□ -0.32
TRAF4-212ENST00000498540 SFRP5Q5T4F7 317 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 FAM71E1Q6IPT2 247 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 OR4C3Q8NH37 302 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAF4-212ENST00000498540 RNF128Q8TEB7 428 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 OSTF1Q92882 214 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 ZBTB8AQ96BR9 441 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 HS6ST2Q96MM7 605 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-212ENST00000498540 HDHD5Q9BXW7 423 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 FUT8Q9BYC5 575 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 SRXN1Q9BYN0 137 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 TRIM2Q9C040 744 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 TAS2R7Q9NYW3 318 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 GRID1Q9ULK0 1009 aa13.07□□□□□ -0.32
TRAF4-212ENST00000498540 YLPM1P49750 1951 aaKnown RBP13.07□□□□□ -0.32
TRAF4-212ENST00000498540 IGHV4-30-2A0A087WSY4 118 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 A0A096LNT2 108 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 DPRXA6NFQ7 191 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 NDUFB5O43674 189 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms