RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DNPEPQ9ULA0 475 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 GMPPBQ9Y5P6 360 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 ASTN1O14525 1302 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 IGHV1OR15-1A0A075B7D0 117 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 SAGE2PA6NJ88 616 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 GPX5O75715 221 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 TIMP1P01033 207 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 HMOX1P09601 288 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 IGLL1P15814 213 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 ADORA2BP29275 332 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 NTSP30990 170 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 BTDP43251 543 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 RPL29P47914 159 aaKnown RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 DHPSP49366 369 aaPredicted RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 PPOXP50336 477 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 CAV2P51636 162 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 MRPS11P82912 194 aaKnown RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 VLDLRP98155 873 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 ZNF154Q13106 437 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 SNX1Q13596 522 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 AANATQ16613 207 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 TMEM184AQ6ZMB5 413 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 DNM1P46Q6ZS02 220 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 TAF8Q7Z7C8 310 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 ADAMTSL2Q86TH1 951 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 SKA3Q8IX90 412 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 ALLCQ8N6M5 410 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 ZNF433Q8N7K0 673 aaPredicted RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 OR9A4Q8NGU2 314 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 DQX1Q8TE96 717 aaKnown RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 C7orf33Q8WU49 177 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 ATG10Q9H0Y0 220 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 GLIPR2Q9H4G4 154 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 COG4Q9H9E3 785 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 PATZ1Q9HBE1 687 aaKnown RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 POLD4Q9HCU8 107 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 ZNF331Q9NQX6 463 aaPredicted RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 LCMT1Q9UIC8 334 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 NAP1L2Q9ULW6 460 aaPredicted RBP2.14□□□□□ -2.07
SMC4-227ENST00000497984 WDR45Q9Y484 360 aa2.14□□□□□ -2.07
SMC4-227ENST00000497984 SMIM28A0A1B0GU29 152 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 A0A1B0GUA9 196 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 A0A1W2PQ67 120 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 C19orf81C9J6K1 198 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 H0YL77 283 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 DFNA5O60443 496 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 IGHV3-48P01763 117 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 RALAP11233 206 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 KIR2DS2P43631 304 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 STARP49675 285 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 TIMM10P62072 90 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 KARSQ15046 597 aaKnown RBP2.13□□□□□ -2.07
SMC4-227ENST00000497984 KCTD19Q17RG1 926 aaPredicted RBP2.13□□□□□ -2.07
SMC4-227ENST00000497984 CFAP221Q4G0U5 840 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 MIER3Q7Z3K6 550 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 ZNF100Q8IYN0 542 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 OR2AP1Q8NGE2 309 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 FBXO30Q8TB52 745 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 URGCPQ8TCY9 931 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 ATP6V0A1Q93050 837 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 IL22RA2Q969J5 263 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 NCLNQ969V3 563 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 TMEM101Q96IK0 257 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 ATP6V0BQ99437 205 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 NRTNQ99748 197 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 TBC1D10AQ9BXI6 508 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 COMMD4Q9H0A8 199 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 ZDHHC11Q9H8X9 412 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 TRPV5Q9NQA5 729 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 CD274Q9NZQ7 290 aa2.13□□□□□ -2.07
SMC4-227ENST00000497984 NOL7Q9UMY1 257 aaKnown RBP2.13□□□□□ -2.07
SMC4-227ENST00000497984 PLEKHG1Q9ULL1 1385 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 PTCH1Q13635 1447 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 IGLV3-16A0A075B6K0 115 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 ARHGAP42A6NI28 874 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 DDX39AO00148 427 aaKnown RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 ABCD4O14678 606 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 EFNA2O43921 213 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 THRBP10828 461 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 VDAC1P21796 283 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 AHCYP23526 432 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 HTR5AP47898 357 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 NUP107P57740 925 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 RPL8P62917 257 aaKnown RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 DAZ2Q13117 558 aaKnown RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 CDKN3Q16667 212 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 FAM120AOSQ5T036 256 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 HSD11B1LQ7Z5J1 315 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 ZNF589Q86UQ0 364 aaPredicted RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 DCAF4L2Q8NA75 395 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 ANKRD20A12PQ8NF67 263 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 ELMO2Q96JJ3 720 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 NOL4LQ96MY1 436 aaPredicted RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 TXN2Q99757 166 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 NMNAT2Q9BZQ4 307 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 KAT8Q9H7Z6 458 aaKnown RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 CAB39LQ9H9S4 337 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 DAZ3Q9NR90 486 aaKnown RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 GDAP2Q9NXN4 497 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 MTRRQ9UBK8 725 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms