RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 GXYLT2A0PJZ3 443 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 CD8B2A6NJW9 211 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 DVL2O14641 736 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 FADS1O60427 444 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 NKX2-2O95096 273 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 UTS2O95399 124 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 IL6P05231 212 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 ALOX5P09917 674 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 CPN1P15169 458 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 MSX1P28360 303 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 TIMP3P35625 211 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 PRIM2P49643 509 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 DSCR4P56555 118 aaPredicted RBP13.92□□□□□ -0.18
NUP50-219ENST00000497960 WNT3P56703 355 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 TFF3Q07654 80 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 STX5Q13190 355 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 SPDYE7PQ495Y7 208 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 DCST1Q5T197 706 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 ZCCHC12Q6PEW1 402 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 SEM1Q6ZVN7 128 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 ACBD4Q8NC06 268 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 ZPLD1Q8TCW7 415 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 PIK3R3Q92569 461 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 HOXB13Q92826 284 aaPredicted RBP13.92□□□□□ -0.18
NUP50-219ENST00000497960 OR52E6Q96RD3 313 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 TBL1XR1Q9BZK7 514 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 DSN1Q9H410 356 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 PTGES2Q9H7Z7 377 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 RMND5AQ9H871 391 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 CALHM2Q9HA72 323 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 NPDC1Q9NQX5 325 aaPredicted RBP13.92□□□□□ -0.18
NUP50-219ENST00000497960 ZCCHC3Q9NUD5 404 aaKnown RBP13.92□□□□□ -0.18
NUP50-219ENST00000497960 FLRT3Q9NZU0 649 aa13.92□□□□□ -0.18
NUP50-219ENST00000497960 NUP214P35658 2090 aaPredicted RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 CCDC154A6NI56 674 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 H0Y3Z8 333 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 CPSF4O95639 269 aaKnown RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 TCEA1P23193 301 aaKnown RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 CEACAM8P31997 349 aaPredicted RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 MAP3K8P41279 467 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 SRYQ05066 204 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 LRRC74AQ0VAA2 488 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 MFSD12Q6NUT3 480 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 DNAJC14Q6Y2X3 702 aaPredicted RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 MSANTD1Q6ZTZ1 278 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 LIX1LQ8IVB5 337 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 ZNF295-AS1Q8N0V1 137 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 FADS6Q8N9I5 356 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 TNIP2Q8NFZ5 429 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 FBXO30Q8TB52 745 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 JADE3Q92613 823 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 FAM120BQ96EK7 910 aaKnown RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 GIMAP5Q96F15 307 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 C14orf79Q96F83 325 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 LRRC46Q96FV0 321 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 TREX2Q9BQ50 279 aaPredicted RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 SLC24A3Q9HC58 644 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 HHATLQ9HCP6 504 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 SIRT3Q9NTG7 399 aaPredicted RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 RPH3AQ9Y2J0 694 aaPredicted RBP13.91□□□□□ -0.18
NUP50-219ENST00000497960 CAPN7Q9Y6W3 813 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 MYO9AB2RTY4 2548 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 ARHGAP21Q5T5U3 1957 aa13.91□□□□□ -0.18
NUP50-219ENST00000497960 PRSS51A0A1B0GVH4 220 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 ZIC3O60481 467 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 CCDC22O60826 627 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 FAM107AO95990 144 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 ACP2P11117 423 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 IGFBP2P18065 325 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 HK1P19367 917 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 BMP5P22003 454 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 CHMP24386 653 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 STARP49675 285 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 GFRA1P56159 465 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 HBA1P69905 142 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 PHC1P78364 1004 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 C17orf67Q0P5P2 114 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 TP53BP2Q13625 1128 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 GANABQ14697 944 aaKnown RBP13.9□□□□□ -0.18
NUP50-219ENST00000497960 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 COX18Q8N8Q8 333 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 SLC16A11Q8NCK7 471 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 OR2M3Q8NG83 312 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 OR56A1Q8NGH5 318 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 OR5AK3PQ8NH89 298 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 SFXN5Q8TD22 340 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 DUSP19Q8WTR2 217 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 VPS33AQ96AX1 596 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 MOAP1Q96BY2 351 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 C16orf58Q96GQ5 468 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 CCDC115Q96NT0 180 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 PANX1Q96RD7 426 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 CCT8L2Q96SF2 557 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 YIPF4Q9BSR8 244 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 CXorf36Q9H7Y0 433 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 SAR1AQ9NR31 198 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 TMEM45AQ9NWC5 275 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms