RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 VMACQ2NL98 169 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 C6orf89Q6UWU4 347 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 CISD2Q8N5K1 135 aaKnown RBP10.88□□□□□ -0.67
CUX1-210ENST00000497815 HIPK4Q8NE63 616 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 OR2T12Q8NG77 320 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 BBS10Q8TAM1 723 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 PHOSPHO1Q8TCT1 267 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 DUSP19Q8WTR2 217 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 REXO5Q96IC2 774 aaKnown RBP10.88□□□□□ -0.67
CUX1-210ENST00000497815 ZNF597Q96LX8 424 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 SPATA9Q9BWV2 254 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 SAP130Q9H0E3 1048 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 ALG2Q9H553 416 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 MTHFD2LQ9H903 347 aaPredicted RBP10.88□□□□□ -0.67
CUX1-210ENST00000497815 CACYBPQ9HB71 228 aaKnown RBP10.88□□□□□ -0.67
CUX1-210ENST00000497815 PPP4R1LQ9P1A2 415 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 TMEM181Q9P2C4 612 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 ANGPT4Q9Y264 503 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 AP3M1Q9Y2T2 418 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 PCDHGB6Q9Y5F9 930 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 HRH3Q9Y5N1 445 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 WIF1Q9Y5W5 379 aa10.88□□□□□ -0.67
CUX1-210ENST00000497815 LRRC3CA6NJW4 275 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 CLDN24A6NM45 220 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 ALG1L2C9J202 215 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 GSTA4O15217 222 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 TRIM3O75382 744 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 PRB1P04280 392 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 NGFRP08138 427 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 GUSBP08236 651 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 TCN1P20061 433 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 PCGF2P35227 344 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 GAS1P54826 345 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 BNIP1Q12981 228 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 ZNF141Q15928 474 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 NDUFAF6Q330K2 333 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 KLHL26Q53HC5 615 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 PRR30Q53SZ7 412 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 ERICH5Q6P6B1 374 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 BNC2Q6ZN30 1099 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 VRK2Q86Y07 508 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 PEX5LQ8IYB4 626 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 MICU2Q8IYU8 434 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 METTL25Q8N6Q8 603 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 FAM156AQ8NDB6 213 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 OR1J4Q8NGS1 313 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 OR52P1PQ8NH57 321 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 RNF138Q8WVD3 245 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 WDR60Q8WVS4 1066 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 SH3YL1Q96HL8 342 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 FRMD6Q96NE9 622 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 GNRHR2Q96P88 292 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 TAAR6Q96RI8 345 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 KCTD14Q9BQ13 255 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 TTTY12Q9BZ98 90 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 TSPAN10Q9H1Z9 355 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 BCL2L10Q9HD36 194 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 ZFP64Q9NPA5 681 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 SDHAF3Q9NRP4 125 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 TAS2R1Q9NYW7 299 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 ABCD2Q9UBJ2 740 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
CUX1-210ENST00000497815 DTNAQ9Y4J8 743 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 ATMQ13315 3056 aa10.87□□□□□ -0.67
CUX1-210ENST00000497815 EXPH5Q8NEV8 1989 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 DSPPQ9NZW4 1301 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 A0A1W2PQD3 144 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 ELOVL7A1L3X0 281 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 PRORSD1PA6NEY8 169 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 SERINC4A6NH21 518 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 AGAP5A6NIR3 686 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 TTLL8A6PVC2 850 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 H3BNH8 94 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 GTPBP1O00178 669 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 EBAG9O00559 213 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 ADAM10O14672 748 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 GYG2O15488 501 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 OIP5O43482 229 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 CYP7B1O75881 506 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 SORBS2O94875 1100 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 OPN1SWP03999 348 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 DBIP07108 87 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 RFPL3SP0C7P2 107 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 IL7RP16871 459 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 TCEA1P23193 301 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 MSX2P35548 267 aaPredicted RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 PPIAP62937 165 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 C17orf67Q0P5P2 114 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 FOXO1Q12778 655 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 TOMM20Q15388 145 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 ZNF311Q5JNZ3 666 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 FNDC7Q5VTL7 733 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 PRAMEF8Q5VWM4 474 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 PRAMEF7Q5VXH5 474 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 TIGD3Q6B0B8 471 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 RPUSD3Q6P087 351 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 FAM180AQ6UWF9 173 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms