RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 GRM6O15303 877 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TLX2O43763 284 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 NCR1O76036 304 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 B3GAT3O94766 335 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 PAK4O96013 591 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 B3GALT4O96024 378 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SERPIND1P05546 499 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 GP1BAP07359 652 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 GALTP07902 379 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 NUDT7P0C024 238 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 LIMS3P0CW19 117 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 LIMS4P0CW20 117 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MGMTP16455 207 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 GKP32189 559 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 THBS2P35442 1172 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 OR1E2P47887 323 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TRAM1Q15629 374 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 C18orf21Q32NC0 220 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 TMEM255AQ5JRV8 349 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 GCNT6Q5T4J0 391 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TAS1R1Q7RTX1 841 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SYT12Q8IV01 421 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 NAGSQ8N159 534 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SAMD12Q8N8I0 201 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 WDSUB1Q8N9V3 476 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 L3MBTL4Q8NA19 623 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 FBXO22Q8NEZ5 403 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MTFMTQ96DP5 389 aaKnown RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 DMRTA2Q96SC8 542 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SMOQ99835 787 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 DUSP26Q9BV47 211 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 PLEKHA1Q9HB21 404 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CACYBPQ9HB71 228 aaKnown RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 NLGN3Q9NZ94 848 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TP53BP1Q12888 1972 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 A0A1B0GWJ7 208 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 H3BN98 237 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CLN5O75503 358 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 REM1O75628 298 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ZDHHC11BP0C7U3 371 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 IGFBP4P22692 258 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MST1P26927 711 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MPGP29372 298 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 AQP1P29972 269 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 P2RY4P51582 365 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CCR9P51686 369 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CAPZA1P52907 286 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 STARD6P59095 220 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 RAB4BP61018 213 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MAT1AQ00266 395 aaKnown RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 TUSC3Q13454 348 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SCARB2Q14108 478 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MPPED2Q15777 294 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 DCST1Q5T197 706 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ZNF697Q5TEC3 545 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ZNF626Q68DY1 528 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 OR7E24Q6IFN5 339 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 C3orf33Q6P1S2 294 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SLC36A4Q6YBV0 504 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 Q6ZTK2 550 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SPATA2LQ8IUW3 424 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 SERPINA12Q8IW75 414 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 DEFB123Q8N688 67 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 OR11G2Q8NGC1 345 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SMAP2Q8WU79 429 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 LRR1Q96L50 414 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ZNF558Q96NG5 402 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 EGFL8Q99944 293 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 JAM3Q9BX67 310 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 OPA3Q9H6K4 179 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ELOVL2Q9NXB9 296 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TVP23BQ9NYZ1 205 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TREM2Q9NZC2 230 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CFAP97Q9P2B7 532 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 METTL1Q9UBP6 276 aaKnown RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 PLEKHA6Q9Y2H5 1048 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 NPFFR2Q9Y5X5 522 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 PLXNA4Q9HCM2 1894 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MTMR11A4FU01 709 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ANKRD61A6NGH8 418 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CHURC1-FNTBB4DL54 471 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 HHLA1C9JL84 531 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 H7C0S8 307 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 J3KTA2 159 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 HYAL3O43820 417 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 STK16O75716 305 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SIX6O95475 246 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 RECKO95980 971 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CHRM5P08912 532 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 CBSLP0DN79 551 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SAGP10523 405 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 RHOQP17081 205 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TYRP1P17643 537 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 HOXA6P31267 233 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CBSP35520 551 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ASMTP46597 345 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MTNR1AP48039 350 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CTSCP53634 463 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms