RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	ALCAM	Q13740	583 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	TMED2	Q15363	201 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	MED22	Q15528	200 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	SLC15A2	Q16348	729 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	SNAPC1	Q16533	368 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	GUK1	Q16774	197 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	SLC36A3	Q495N2	470 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	RAB41	Q5JT25	222 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	MEDAG	Q5VYS4	303 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	FRMPD2B	Q6IN97	320 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	C19orf48	Q6RUI8	117 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	LRRN1	Q6UXK5	716 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRSS42	Q7Z5A4	293 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	NRROS	Q86YC3	692 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	KLHL7	Q8IXQ5	586 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	METTL4	Q8N3J2	472 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	KIF2B	Q8N4N8	673 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	MFSD9	Q8NBP5	474 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCDC197	Q8NCU1	140 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCNY	Q8ND76	341 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	OR4K14	Q8NGD5	310 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	SPATA22	Q8NHS9	363 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	NEK7	Q8TDX7	302 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	CA5BP1	Q8WTZ4	195 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	EEF2KMT	Q96G04	330 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	C5orf30	Q96GV9	206 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	MBOAT7	Q96N66	472 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	PANX1	Q96RD7	426 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCT8L2	Q96SF2	557 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	KRT12	Q99456	494 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	MGME1	Q9BQP7	344 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	ZNF559	Q9BR84	538 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	C7orf50	Q9BRJ6	194 aa	Known RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	TRIM9	Q9C026	710 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	NXF3	Q9H4D5	531 aa	Known RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	VAT1L	Q9HCJ6	419 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	6e-7	■■■■□ 22.5
CCDC66-222	ENST00000494672	BIN3	Q9NQY0	253 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	MRPL22	Q9NWU5	206 aa	Known RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	IMPAD1	Q9NX62	359 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	MLX	Q9UH92	298 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	SLC12A6	Q9UHW9	1150 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	FBXW2	Q9UKT8	454 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	GUCA1B	Q9UMX6	200 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	SCML1	Q9UN30	329 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	PLEKHA6	Q9Y2H5	1048 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	WIF1	Q9Y5W5	379 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	ALG5	Q9Y673	324 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	ZHX2	Q9Y6X8	837 aa		4.24	□□□□□ -1.73
CCDC66-222	ENST00000494672	ABCC4	O15439	1325 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	DAPK1	P53355	1430 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	FMN1	Q68DA7	1419 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	SPATA31E1	Q6ZUB1	1445 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	ADGRL3	Q9HAR2	1447 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	ELOVL7	A1L3X0	281 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	ASPDH	A6ND91	283 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCDC160	A6NGH7	325 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	ASB14	A6NK59	587 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	OR2AG2	A6NM03	316 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	MAGEB17	A8MXT2	336 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRAMEF26	H0Y7S4	382 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	ABCD4	O14678	606 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	HS3ST1	O14792	307 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	PAPSS1	O43252	624 aa	Predicted RBP	4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	DFNA5	O60443	496 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRAMEF11	O60813	436 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	VPS26A	O75436	327 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRKRA	O75569	313 aa	Known RBP	4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	SULT1C4	O75897	302 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	DFFB	O76075	338 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	SEC24A	O95486	1093 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	OAS1	P00973	400 aa	Known RBP	4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	PIGR	P01833	764 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	SRPRA	P08240	638 aa	Known RBP	4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	HMBS	P08397	361 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	MELTF	P08582	738 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	CFC1B	P0CG36	223 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	CFC1	P0CG37	223 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	TRIM49	P0CI25	452 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	TRIM49C	P0CI26	452 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	SLC35E2B	P0CK96	405 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	SLC35E2	P0CK97	266 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	GIMD1	P0DJR0	217 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	HSPD1	P10809	573 aa	Known RBP	4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	ETS2	P15036	469 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	FOSL2	P15408	326 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	RPA2	P15927	270 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	LBP	P18428	481 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	FUT1	P19526	365 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	OGN	P20774	298 aa	Known RBP	4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	DNASE1	P24855	282 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	MARK3	P27448	753 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	CALML3	P27482	149 aa		4.23	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCR7	P32248	378 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms