RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 YRDCQ86U90 279 aaKnown RBP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 DPP10Q8N608 796 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 ANKFN1Q8N957 763 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 GATSQ8NAP1 163 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF527Q8NB42 609 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 FAM83FQ8NEG4 500 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 OR4K17Q8NGC6 315 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 SAP130Q9H0E3 1048 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 NSRP1Q9H0G5 558 aaKnown RBP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 EXO5Q9H790 373 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 ARMCX1Q9P291 453 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 SPRR3Q9UBC9 169 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 TNFRSF10DQ9UBN6 386 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 LIPT1Q9Y234 373 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 WDR45Q9Y484 360 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 GMEB1Q9Y692 573 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 ZGRF1Q86YA3 2104 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 CENPVL1A0A0U1RR11 272 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 LOC100653049A0A140TA62 436 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 CLEC18AA5D8T8 446 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 OR14I1A6ND48 311 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 FBP2O00757 339 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 PRRG2O14669 202 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 LRRTM2O43300 516 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 ZIC3O60481 467 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 UGT2B17O75795 530 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 KRT34O76011 436 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 H6PDO95479 791 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 CHRM4P08173 479 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 DPP4P27487 766 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 CA7P43166 264 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 RNF144AP50876 292 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-208ENST00000494334 DSCR4P56555 118 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-208ENST00000494334 DSTNP60981 165 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 CHRNEQ04844 493 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 MAPK11Q15759 364 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF141Q15928 474 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 GXYLT1Q4G148 440 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 C4orf17Q53FE4 359 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 RUNDC3AQ59EK9 446 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 PDZK1Q5T2W1 519 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 CLEC18BQ6UXF7 455 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 LRRC74BQ6ZQY2 392 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
COL1A1-208ENST00000494334 DOLPP1Q86YN1 238 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 MISPQ8IVT2 679 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF619Q8N2I2 560 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 CLEC18CQ8NCF0 446 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 PHOSPHO1Q8TCT1 267 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 RELTQ969Z4 430 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 ZG16BQ96DA0 208 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 TRNT1Q96Q11 434 aaKnown RBP12.31□□□□□ -0.44
COL1A1-208ENST00000494334 OR2B2Q9GZK3 357 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 RAD21L1Q9H4I0 556 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 PTGES2Q9H7Z7 377 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 POLE3Q9NRF9 147 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 SH3BGRL2Q9UJC5 107 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 ERRFI1Q9UJM3 462 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-208ENST00000494334 TINAGQ9UJW2 476 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 SLC6A5Q9Y345 797 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 MRPS18CQ9Y3D5 142 aaKnown RBP12.31□□□□□ -0.44
COL1A1-208ENST00000494334 DTNAQ9Y4J8 743 aa12.31□□□□□ -0.44
COL1A1-208ENST00000494334 A0A1B0GUH1 482 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 SLC22A2O15244 555 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 GMFGO60234 142 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 KIAA0513O60268 411 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 CCDC22O60826 627 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 TPOP07202 933 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 NUDT7P0C024 238 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 TFPTP0C1Z6 253 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 NR2F1P10589 423 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 BMP2P12643 396 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 MSX1P28360 303 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 HPCAP84074 193 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 FADDQ13158 208 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 MAPRE2Q15555 327 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 MAPK14Q16539 360 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 NHSL2Q5HYW2 709 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 EMC4Q5J8M3 183 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 DHDDSQ86SQ9 333 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 MTDHQ86UE4 582 aaKnown RBP12.3□□□□□ -0.44
COL1A1-208ENST00000494334 CD163Q86VB7 1156 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 FJX1Q86VR8 437 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 C10orf111Q8N326 155 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 FAM26EQ8N5C1 309 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF614Q8N883 585 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 OR14L1PQ8NHC6 308 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 SARAFQ96BY9 339 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 DTNBP1Q96EV8 351 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 CGREF1Q99674 301 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 CCDC106Q9BWC9 280 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 SLC38A1Q9H2H9 487 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 IKZF5Q9H5V7 419 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 RUBCNLQ9H714 662 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 HHATLQ9HCP6 504 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 THUMPD1Q9NXG2 353 aaKnown RBP12.3□□□□□ -0.44
COL1A1-208ENST00000494334 TAS2R10Q9NYW0 307 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 P2RX2Q9UBL9 471 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 DKKL1Q9UK85 242 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms