RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SHISA6Q6ZSJ9 500 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 HIST3H2AQ7L7L0 130 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 KRT77Q7Z794 578 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 LRRTM1Q86UE6 522 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 GALNT13Q8IUC8 556 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TRAPPC5Q8IUR0 188 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PIANPQ8IYJ0 282 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 CLDN19Q8N6F1 224 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 GPATCH11Q8N954 259 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 GDAP1Q8TB36 358 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TEKT4Q8WW24 435 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 C1orf54Q8WWF1 131 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 FGF11Q92914 225 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 RAB7BQ96AH8 199 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 SGF29Q96ES7 293 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 IMP4Q96G21 291 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF414Q96IQ9 312 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 NSL1Q96IY1 281 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF641Q96N77 438 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 QKIQ96PU8 341 aaKnown RBP eCLIP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF670Q9BS34 389 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 POLR1EQ9GZS1 481 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PHPT1Q9NRX4 125 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 IMP3Q9NV31 184 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 INTS9Q9NV88 658 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 GALPQ9UBC7 116 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 RSPH14Q9UHP6 348 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 DNPEPQ9ULA0 475 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 SLC17A4Q9Y2C5 497 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PCDHGA1Q9Y5H4 931 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ALG6Q9Y672 507 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 BOD1L1Q8NFC6 3051 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 FREM1Q5H8C1 2179 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 SPTA1P02549 2419 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 A0A087X0M5 115 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 IGHV5-51A0A0C4DH38 117 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 A0A1B0GX30 115 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CCDC162PA2VCL2 907 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM8BA6NDV4 472 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 A8MU10 97 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 BTN3A3O00478 584 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OR1I1O60431 355 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 RAD1O60671 282 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 PIAS1O75925 651 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 KIAA0754O94854 1291 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 SLC25A14O95258 325 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 DUS4LO95620 317 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CPNE6O95741 557 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 F10P00742 488 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 DNAH10OSP0CZ25 163 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 MYBL1P10243 752 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ALPPL2P10696 532 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 FOLR1P15328 257 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CCNCP24863 283 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 RBMS1P29558 406 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 SERPINB6P35237 376 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ACTN2P35609 894 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TRIM23P36406 574 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 KCNJ1P48048 391 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CSNK1DP48730 415 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 HCAR3P49019 387 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF140P52738 457 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 EFNA3P52797 238 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 AIF1P55008 147 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 UBE2IP63279 158 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CCZ1BP86790 482 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CCZ1P86791 482 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 XIAPP98170 497 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 MS4A2Q01362 244 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ZFP36L1Q07352 338 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 LGALS3BPQ08380 585 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OVGP1Q12889 678 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GAGE2BQ13066 116 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 MSLNQ13421 630 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ELOCQ15369 112 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 SIX1Q15475 284 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 MEP1AQ16819 746 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 HADHQ16836 314 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 DEFB109BQ30KR1 87 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GLIPR1L2Q4G1C9 344 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GAGE2EQ4V326 116 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF789Q5FWF6 425 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ANKRD20A2Q5SQ80 823 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ANKRD20A1Q5TYW2 823 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 C1orf189Q5VU69 101 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ANKRD20A3Q5VUR7 823 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ANKRD22Q5VYY1 191 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ITPRIPL1Q6GPH6 555 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GAGE2AQ6NT46 116 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM220Q6QAJ8 160 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 PAQR6Q6TCH4 344 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 PID1Q7Z2X4 250 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GLT6D1Q7Z4J2 308 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 KIAA1328Q86T90 577 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF554Q86TJ5 538 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 C17orf82Q86X59 251 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GKN2Q86XP6 184 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CEP97Q8IW35 865 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms