RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 WFIKKN1Q96NZ8 548 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 MS4A4EQ96PG1 132 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 STACQ99469 402 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 PIP5K1AQ99755 562 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ANKZF1Q9H8Y5 726 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 PLSCR4Q9NRQ2 329 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 UBQLN4Q9NRR5 601 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 DUSP22Q9NRW4 184 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 BEX4Q9NWD9 120 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 FBXO34Q9NWN3 711 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 NDRG3Q9UGV2 375 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 MID2Q9UJV3 735 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 TRAF6Q9Y4K3 522 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 TLN2Q9Y4G6 2542 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 CADP27708 2225 aa7.52□□□□□ -1.2
SMARCB1-207ENST00000491967 ABCA2Q9BZC7 2435 aa7.52□□□□□ -1.2
SMARCB1-207ENST00000491967 TMEM233B4DJY2 109 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 NPIPB9F8W1W9 429 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ETV2O00321 342 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 DNAJA2O60884 412 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 CRCPO75575 148 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 AQP8O94778 261 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 SOX30O94993 753 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 OXSR1O95747 527 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 HSPA4LO95757 839 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 HOXB4P17483 251 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 CRYGSP22914 178 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 CCKARP32238 428 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ETV4P43268 484 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 MANFP55145 182 aaKnown RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 RAC1P63000 192 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 PON3Q15166 354 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 DUSP5Q16690 384 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 KLHL26Q53HC5 615 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 SH2D4BQ5SQS7 431 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 RAET1LQ5VY80 246 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 FAM214BQ7L5A3 538 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 MISPQ8IVT2 679 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 NUP43Q8NFH3 380 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ZFP28Q8NHY6 868 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 CDC26Q8NHZ8 85 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 GPR151Q8TDV0 419 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 CAVIN3Q969G5 261 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 GFM2Q969S9 779 aaKnown RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ZBTB8AQ96BR9 441 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 TRIM44Q96DX7 344 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 FAM120BQ96EK7 910 aaKnown RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 C16orf58Q96GQ5 468 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF845Q96IR2 970 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 C3orf30Q96M34 536 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 TSSK3Q96PN8 268 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 NPAS1Q99742 590 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 SLC39A3Q9BRY0 314 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 TMEM109Q9BVC6 243 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 BTBD2Q9BX70 525 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 PINK1Q9BXM7 581 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 TBL1XR1Q9BZK7 514 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ROPN1BQ9BZX4 212 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 IQCGQ9H095 443 aaKnown RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ROPN1Q9HAT0 212 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 GPATCH2Q9NW75 528 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 SLC17A7Q9P2U7 560 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 ACTL7BQ9Y614 415 aa7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 FN1P02751 2386 aaKnown RBP7.52□□□□□ -1.21
SMARCB1-207ENST00000491967 USF3Q68DE3 2245 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 A0A1W2PRB8 838 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 C16orf97H3BN30 126 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 PIP5K1BO14986 540 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 SCAMP2O15127 329 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 AKAP10O43572 662 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 NDUFB5O43674 189 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 TYROBPO43914 113 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 EFNA2O43921 213 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 SS18L1O75177 396 aaPredicted RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 LYPLA1O75608 230 aaPredicted RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 NTN1O95631 604 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 CHEK2O96017 543 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 LINGO3P0C6S8 592 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 LAMP1P11279 417 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 FCGR2AP12318 317 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 ADH6P28332 368 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 RPL3P39023 403 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 SLC6A8P48029 635 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 CPA2P48052 419 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 SERPINB4P48594 390 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 RPS3AP61247 264 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 RPL38P63173 70 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 STX5Q13190 355 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 PLPPR5Q32ZL2 321 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 C6orf136Q5SQH8 315 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 CPTPQ5TA50 214 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 ESPNLQ6ZVH7 1005 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 CHMP1BQ7LBR1 199 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 R3HCC1LQ7Z5L2 792 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 MTERF4Q7Z6M4 381 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 UBQLNLQ8IYU4 475 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 LRRC75A-AS1Q8N1F1 130 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 NATD1Q8N6N6 113 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF610Q8N9Z0 462 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms