RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 TMA16Q96EY4 203 aaKnown RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 PLEKHA8Q96JA3 519 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 SERAC1Q96JX3 654 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 DNAJC1Q96KC8 554 aaKnown RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 HARBI1Q96MB7 349 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 RIT2Q99578 217 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 OLFM1Q99784 485 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 FNDC11Q9BVV2 318 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 YTHDF1Q9BYJ9 559 aaKnown RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 SLC2A11Q9BYW1 496 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 CATSPERBQ9H7T0 1116 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 LRRC4Q9HBW1 653 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 CSNK1G1Q9HCP0 422 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 CHMP1AQ9HD42 196 aaPredicted RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 MKKSQ9NPJ1 570 aaPredicted RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 TUBG2Q9NRH3 451 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 OSER1Q9NX31 292 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 TMEM9Q9P0T7 183 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 NYAP2Q9P242 653 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 ERRFI1Q9UJM3 462 aaPredicted RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 SAMHD1Q9Y3Z3 626 aaKnown RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 AP4S1Q9Y587 144 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 STON1Q9Y6Q2 735 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 GREB1LQ9C091 1923 aaPredicted RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 ZNF541Q9H0D2 1346 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 RGPD3A6NKT7 1758 aaPredicted RBP4.4□□□□□ -1.71
RTN4-215ENST00000491592 RGPD4Q7Z3J3 1758 aa4.4□□□□□ -1.71
RTN4-215ENST00000491592 TAF1P21675 1872 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 A0A1W2PRB8 838 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 TCRBV9S1A1TA0A576 114 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 PLSCR5A0PG75 271 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 DUXAA6NLW8 204 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 H3BNH8 94 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 H3BSA7 217 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 EEF2KO00418 725 aaKnown RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 ITGB1BP1O14713 200 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 BCKDKO14874 412 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 MSI1O43347 362 aaKnown RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 IDH3BO43837 385 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 BCAS1O75363 584 aaPredicted RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 LYPLA2O95372 231 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 WNT1P04628 370 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 SERPINE1P05121 402 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 IL6P05231 212 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 CA3P07451 260 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 ANXA4P09525 319 aaPredicted RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 ZSCAN5DPP0CG00 497 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 COX4I1P13073 169 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 ITGB6P18564 788 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 CD58P19256 250 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 POLR2CP19387 275 aaPredicted RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 ITGAXP20702 1163 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 HNF1AP20823 631 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 PIK3R1P27986 724 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 PSMB4P28070 264 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 TYK2P29597 1187 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 RPL22P35268 128 aaKnown RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 CDKN2BP42772 138 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 MAGEA6P43360 314 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 KCNJ3P48549 501 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 TMED10P49755 219 aaKnown RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 RGS7P49802 495 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 GPR143P51810 404 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 TFDP2Q14188 446 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 DPYSL3Q14195 570 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 HEPACAMQ14CZ8 416 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 SNRNP35Q16560 246 aaKnown RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 ACKR1Q16570 336 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 SRSF7Q16629 238 aaKnown RBP eCLIP4.39□□□□□ -1.71
RTN4-215ENST00000491592 LRRC36Q1X8D7 754 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 ADPRMQ3LIE5 342 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 FNBP1LQ5T0N5 605 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 MORN5Q5VZ52 161 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 LYSMD4Q5XG99 296 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 FBXO46Q6PJ61 603 aaPredicted RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 DEF8Q6ZN54 512 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 CYP4V2Q6ZWL3 525 aaPredicted RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 FAM57BQ71RH2 274 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 ERASQ7Z444 233 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 GPR141Q7Z602 305 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 TECPR1Q7Z6L1 1165 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 TSPAN33Q86UF1 283 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 KLBQ86Z14 1044 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 TGIF2LXQ8IUE1 241 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 ZNF683Q8IZ20 524 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 DEFB107AQ8IZN7 70 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 LIX1Q8N485 282 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 PACRGLQ8N7B6 248 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 ZNF611Q8N823 705 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 OR5T3Q8NGG3 340 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 SEMA4DQ92854 862 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 FAM46BQ96A09 425 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 EME1Q96AY2 570 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 SLC25A36Q96CQ1 311 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
RTN4-215ENST00000491592 CNBD2Q96M20 576 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 BBS4Q96RK4 519 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 SIGLEC11Q96RL6 698 aa4.39□□□□□ -1.71
RTN4-215ENST00000491592 MTERF1Q99551 399 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms