RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PRPH2P23942 346 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 PSMA4P25789 261 aaKnown RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 EIF1AXP47813 144 aaKnown RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 CCT5P48643 541 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 PRIM2P49643 509 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 MANFP55145 182 aaKnown RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 PDE7AQ13946 482 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 LASP1Q14847 261 aaKnown RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 CCDC153Q494R4 210 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 CYP27C1Q4G0S4 372 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 TRABD2AQ86V40 505 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 LCA5Q86VQ0 697 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 CXorf67Q86X51 503 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 CLECL1Q8IZS7 167 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 ATP6V1C2Q8NEY4 427 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 OR5D16Q8NGK9 328 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 TCP10LQ8TDR4 215 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 HOXB13Q92826 284 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 FAM120BQ96EK7 910 aaKnown RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 CHMP6Q96FZ7 201 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 APOPT1Q96IL0 206 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 MARK4Q96L34 752 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 UCN2Q96RP3 112 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 KLHL4Q9C0H6 718 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 C20orf27Q9GZN8 174 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 C12orf49Q9H741 205 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 RNF122Q9H9V4 155 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 UBTD1Q9HAC8 227 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 FAM120CQ9NX05 1096 aaKnown RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 STK38LQ9Y2H1 464 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 TRAF6Q9Y4K3 522 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 SNX8Q9Y5X2 465 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 SPG11Q96JI7 2443 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 ITPR3Q14573 2671 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 NUP214P35658 2090 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 A0A1W2PRB8 838 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 C9JVG2 144 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 SLC28A1O00337 649 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 RGS14O43566 566 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 TRIM13O60858 407 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 CDH16O75309 829 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 C6orf47O95873 294 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 HMGN2P05204 90 aaKnown RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 NID1P14543 1247 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 HOXC12P31275 282 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 SFTPDP35247 375 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 UGT2B10P36537 528 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 CD79BP40259 229 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 FRKP42685 505 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 KCNJ5P48544 419 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 NR1H2P55055 460 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 PRR5P85299 388 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 SORDQ00796 357 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 ZNF117Q03924 483 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 FOXF1Q12946 379 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 GUSBP1Q15486 140 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 SGCBQ16585 318 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 PLPPR5Q32ZL2 321 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 EXOSC6Q5RKV6 272 aaKnown RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 CDC73Q6P1J9 531 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 KIF18BQ86Y91 864 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 TDRPQ86YL5 185 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 MEIOBQ8N635 442 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 OR10D3Q8NH80 312 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 RFWD2Q8NHY2 731 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 FAM110BQ8TC76 370 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 NINJ1Q92982 152 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 ZNF775Q96BV0 537 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 ERP27Q96DN0 273 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 CCDC126Q96EE4 140 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 ADGRG7Q96K78 797 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 CCT7Q99832 543 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 SRXN1Q9BYN0 137 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 STMN4Q9H169 189 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 L2HGDHQ9H9P8 463 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 NEUROD4Q9HD90 331 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 ZCCHC3Q9NUD5 404 aaKnown RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 MED17Q9NVC6 651 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 KCNE5Q9UJ90 142 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 ABCG2Q9UNQ0 655 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 MRPS18CQ9Y3D5 142 aaKnown RBP7.98□□□□□ -1.13
HDAC3-211ENST00000491581 NF1P21359 2839 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 PRR14LQ5THK1 2151 aa7.98□□□□□ -1.13
HDAC3-211ENST00000491581 ZFHX3Q15911 3703 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 CCDC151A5D8V7 595 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 TRIM64A6NGJ6 449 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 TRIM64BA6NI03 449 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 KIF2AO00139 706 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 MSTNO14793 375 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 SMAD7O15105 426 aaKnown RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 SCAMP2O15127 329 aaKnown RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 CTIFO43310 598 aaKnown RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 NDUFB5O43674 189 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 TNFRSF21O75509 655 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 KCNH1O95259 989 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 NUDT7P0C024 238 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 POU2F1P14859 743 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 GCKP35557 465 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 PPP2R2AP63151 447 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms