RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 MFSD12Q6NUT3 480 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 ADGRE4PQ86SQ3 457 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 GCNT2Q8N0V5 402 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 SMPDL3BQ92485 455 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 PIK3R3Q92569 461 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 ZBTB8AQ96BR9 441 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 REXO5Q96IC2 774 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 DACH2Q96NX9 599 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 STACQ99469 402 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 GPATCH1Q9BRR8 931 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 BTBD2Q9BX70 525 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 PINK1Q9BXM7 581 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 TIGARQ9NQ88 270 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 ARGLU1Q9NWB6 273 aaPredicted RBP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 NOP53Q9NZM5 478 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 ZDHHC2Q9UIJ5 367 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 MCTS1Q9ULC4 181 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 ABCA12Q86UK0 2595 aa14.98□□□□□ -0.01
PDLIM2-217ENST00000491330 OR2M5A3KFT3 312 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 GJE1A6NN92 205 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 TMEM233B4DJY2 109 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 GTPBP1O00178 669 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 HCRTR2O43614 444 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 PABPC4LP0CB38 370 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 ZNF17P17021 662 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 CPOXP36551 454 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 EIF1P41567 113 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 RPL14P50914 215 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 PRSS53Q2L4Q9 553 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 GRAMD1BQ3KR37 738 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 HHATQ5VTY9 493 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 SPNS3Q6ZMD2 512 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 CAMKMTQ7Z624 323 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 MTERF4Q7Z6M4 381 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 ACTRT2Q8TDY3 377 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 ACTRT3Q9BYD9 372 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 BHLHE41Q9C0J9 482 aaPredicted RBP14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 PIGUQ9H490 435 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 ELOVL5Q9NYP7 299 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 NKIRAS1Q9NYS0 192 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 ZNF226Q9NYT6 803 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 CLCF1Q9UBD9 225 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 EMC9Q9Y3B6 208 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 ZNF337Q9Y3M9 751 aa14.97□□□□□ -0.01
PDLIM2-217ENST00000491330 IGLV3-32A0A0A0MS00 114 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 GXYLT2A0PJZ3 443 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 SLCO1B7G3V0H7 640 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 KCNK2O95069 426 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 OXSR1O95747 527 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 NUDT14O95848 222 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 HMGN2P05204 90 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 DNAJA1P31689 397 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 SLC1A6P48664 564 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 CTBP2P56545 445 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 PPP2R2AP63151 447 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 EMX2Q04743 252 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 STX3Q13277 289 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 SNTB1Q13884 538 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 KEAP1Q14145 624 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 LASP1Q14847 261 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 ATG16L1Q676U5 607 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 FIGNL1Q6PIW4 674 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 SLC16A11Q8NCK7 471 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 B4GALNT2Q8NHY0 566 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 FBXO30Q8TB52 745 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 FAM120BQ96EK7 910 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 ZNF845Q96IR2 970 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 C1orf50Q9BV19 199 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 DUSP26Q9BV47 211 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 TMBIM4Q9HC24 238 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 THAP1Q9NVV9 213 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 JKAMPQ9P055 326 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 VDAC3Q9Y277 283 aa14.96□□□□□ -0.01
PDLIM2-217ENST00000491330 A0A1W2PNV4 684 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 A0A1W2PQD3 144 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 TMEM120BA0PK00 339 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 WDR91A4D1P6 747 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 A8MXE2 369 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 EIF1AYO14602 144 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 GMFGO60234 142 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 AGR2O95994 175 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 AK1P00568 194 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 SOAT1P35610 550 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 EIF1AXP47813 144 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 CLDN15P56746 228 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 FOXF2Q12947 444 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 CASP8Q14790 479 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 PON3Q15166 354 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 DUSP5Q16690 384 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 PGS1Q32NB8 556 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 ZNF385BQ569K4 471 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 AGBL2Q5U5Z8 902 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 CDC73Q6P1J9 531 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 POMZP3Q6PJE2 187 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 STK32CQ86UX6 486 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 OR7A2PQ8NGA2 310 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 OR4C3Q8NH37 302 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 PHOSPHO1Q8TCT1 267 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 SFXN5Q8TD22 340 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 HOXB13Q92826 284 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms