RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 BMP8BP34820 402 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 TRHRP34981 398 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 DGKGP49619 791 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 SMSP52788 366 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CASP6P55212 293 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 RBBP4Q09028 425 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 GRIN2CQ14957 1233 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 ZSWIM7Q19AV6 140 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 KLHL26Q53HC5 615 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 TCTE1Q5JU00 501 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 SLCO4C1Q6ZQN7 724 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 IKBIPQ70UQ0 350 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 SSX9Q7RTT3 188 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 BMP8AQ7Z5Y6 402 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 MARCH9Q86YJ5 346 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 NANOGP1Q8N7R0 232 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 EDARADDQ8WWZ3 215 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 ADAMTS14Q8WXS8 1223 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 TREX2Q9BQ50 279 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 WDR77Q9BQA1 342 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 FNDC11Q9BVV2 318 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 ASXL3Q9C0F0 2248 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CXorf36Q9H7Y0 433 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 B3GAT2Q9NPZ5 323 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 NDUFB11Q9NX14 153 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 SPHK1Q9NYA1 384 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 ASH2LQ9UBL3 628 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CLEC4AQ9UMR7 237 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CNOT1A5YKK6 2376 aaKnown RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 LOC390937A0A1W2PQ73 354 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 TMEM82A0PJX8 343 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 UGDHO60701 494 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 EFCAB14O75071 495 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 MPC2O95563 127 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 SYPP08247 313 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 PRG2P13727 222 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 MVDP53602 400 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CLDN20P56880 219 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 PPP3R1P63098 170 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 MLLT11Q13015 90 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 GINS1Q14691 196 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 KLHL22Q53GT1 634 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 BICRALQ6AI39 1079 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 LHFPL3Q86UP9 236 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 DMRTC2Q8IXT2 367 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 CLDN22Q8N7P3 220 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 PROKR2Q8NFJ6 384 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 SLC38A5Q8WUX1 472 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 F2RL3Q96RI0 385 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 DPH7Q9BTV6 452 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 RBCK1Q9BYM8 510 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 WNT5BQ9H1J7 359 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CHST8Q9H2A9 424 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 BRF2Q9HAW0 419 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 COL4A4P53420 1690 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 C2orf92A0A1B0GVN3 265 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 A0A1W2PRQ8 180 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 AGAP14A8MT82 685 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 PRSS47A8MTI9 375 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 ANHXE9PGG2 379 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 GTPBP1O00178 669 aaKnown RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 CCL16O15467 120 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 BRINP1O60477 761 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CFDP00746 253 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 OSMP13725 252 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 HSD3B1P14060 373 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 HSD3B2P26439 372 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 HOXA6P31267 233 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 GPX4P36969 197 aaPredicted RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 ETV5P41161 510 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 LSM11P83369 360 aaKnown RBP eCLIP9.54□□□□□ -0.88
BRD9-209ENST00000490814 DEFA6Q01524 100 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 RIPPLY1Q0D2K3 151 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 MPEG1Q2M385 716 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 RAET1GQ6H3X3 334 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 DEFB123Q8N688 67 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 BEST4Q8NFU0 473 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 OR5D16Q8NGK9 328 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 SETD7Q8WTS6 366 aaKnown RBP9.54□□□□□ -0.88
BRD9-209ENST00000490814 GLYATL1Q969I3 302 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 WBP1Q96G27 269 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 PFDN5Q99471 154 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 TMEM175Q9BSA9 504 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 CRB3Q9BUF7 120 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 ABCG5Q9H222 651 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 DMRT3Q9NQL9 472 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
BRD9-209ENST00000490814 TUBAL3A6NHL2 446 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 SLC43A1O75387 559 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 ERAL1O75616 437 aaKnown RBP9.53□□□□□ -0.88
BRD9-209ENST00000490814 S100A8P05109 93 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 C1GALT1C1LP0DN25 315 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 VIPR1P32241 457 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 DEFA5Q01523 94 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 MAP4K2Q12851 820 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 PUM1Q14671 1186 aaKnown RBP eCLIP9.53□□□□□ -0.884e-7■■□□□ 11.6
BRD9-209ENST00000490814 NUMA1Q14980 2115 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 CRB2Q5IJ48 1285 aa9.53□□□□□ -0.88
BRD9-209ENST00000490814 IDNKQ5T6J7 187 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms