RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 GTF3C1Q12789 2109 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 C17orf51A8MQB3 221 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 B4DXG7 233 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 FAM47E-STBD1D6RA91 191 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 H3BNH8 94 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 STX11O75558 287 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 KRT75O95678 551 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 GUSBP08236 651 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 ZCCHC18P0CG32 403 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 OR12D1P0DN82 309 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 CPN1P15169 458 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 CHMP24386 653 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 MAGEA8P43361 318 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 ZFP36L2P47974 494 aaKnown RBP15.75■□□□□ 0.11
MDC1-206ENST00000489540 KHKP50053 298 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 ATP4BP51164 291 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 GFRA1P56159 465 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 KLHL26Q53HC5 615 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 HEPHL1Q6MZM0 1159 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 C16orf62Q7Z3J2 963 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 MTERF4Q7Z6M4 381 aaKnown RBP15.75■□□□□ 0.11
MDC1-206ENST00000489540 MARVELD2Q8N4S9 558 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 OR9I1Q8NGQ6 314 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 XAGE5Q8WWM1 108 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 WDYHV1Q96HA8 205 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 SFXN2Q96NB2 322 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 TTYH2Q9BSA4 534 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 RABEP2Q9H5N1 569 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 NPHS2Q9NP85 383 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 FAM215AQ9Y5M1 114 aa15.75■□□□□ 0.11
MDC1-206ENST00000489540 KLF2Q9Y5W3 355 aaPredicted RBP15.75■□□□□ 0.11
MDC1-206ENST00000489540 DIDO1Q9BTC0 2240 aaKnown RBP15.75■□□□□ 0.11
MDC1-206ENST00000489540 LINC01387J3KSC0 135 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 ANP32DO95626 131 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 GSNP06396 782 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 HK1P19367 917 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 DCTP40126 519 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 CDKN2CP42773 168 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 TIGD2Q4W5G0 525 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 AP1ARQ63HQ0 302 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 RTL6Q6ICC9 239 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 TNFAIP8L2Q6P589 184 aaPredicted RBP15.74■□□□□ 0.11
MDC1-206ENST00000489540 NCCRP1Q6ZVX7 275 aaPredicted RBP15.74■□□□□ 0.11
MDC1-206ENST00000489540 RNF130Q86XS8 419 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 ASB5Q8WWX0 329 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 VPS33AQ96AX1 596 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 C1GALT1C1Q96EU7 318 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 NMUR2Q9GZQ4 415 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 POLE3Q9NRF9 147 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 DCTN4Q9UJW0 460 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 TRIM33Q9UPN9 1127 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 RPH3AQ9Y2J0 694 aaPredicted RBP15.74■□□□□ 0.11
MDC1-206ENST00000489540 DNAJC13O75165 2243 aa15.74■□□□□ 0.11
MDC1-206ENST00000489540 EXPH5Q8NEV8 1989 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 A0A087WZY1 265 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 NPIPB9F8W1W9 429 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 CLDN14O95500 239 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 EPPINO95925 133 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 GLI4P10075 376 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 CASP9P55211 416 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 NUP107P57740 925 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 SQLEQ14534 574 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 BCL2A1Q16548 175 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 ZNF630Q2M218 657 aaPredicted RBP15.73■□□□□ 0.11
MDC1-206ENST00000489540 BLOC1S3Q6QNY0 202 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 RPRMLQ8N4K4 120 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 GATSQ8NAP1 163 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 OR10Q1Q8NGQ4 319 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 ZPLD1Q8TCW7 415 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 OIT3Q8WWZ8 545 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 RAB8BQ92930 207 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 SDCCAG3Q96C92 435 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 THOC1Q96FV9 657 aaKnown RBP15.73■□□□□ 0.11
MDC1-206ENST00000489540 PIGQQ9BRB3 760 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 ZNF350Q9GZX5 532 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 CAMK2AQ9UQM7 478 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 LIPT1Q9Y234 373 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 DTNAQ9Y4J8 743 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 PTPN13Q12923 2485 aa15.73■□□□□ 0.11
MDC1-206ENST00000489540 SPTAN1Q13813 2472 aaKnown RBP15.73■□□□□ 0.11
MDC1-206ENST00000489540 HECTD1Q9ULT8 2610 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 SPTBN1Q01082 2364 aaKnown RBP15.72■□□□□ 0.11
MDC1-206ENST00000489540 NCF2P19878 526 aaPredicted RBP15.72■□□□□ 0.11
MDC1-206ENST00000489540 CHRNB4P30926 498 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 B3GALT5-AS1P59052 145 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 RCAN2Q14206 197 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 ACSF3Q4G176 576 aaPredicted RBP15.72■□□□□ 0.11
MDC1-206ENST00000489540 C6orf10Q5SRN2 563 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 METTL21CQ5VZV1 264 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 FUNDC1Q8IVP5 155 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 B4GALNT2Q8NHY0 566 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 RFWD2Q8NHY2 731 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 PHOSPHO1Q8TCT1 267 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 ZFP90Q8TF47 636 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 CA5BP1Q8WTZ4 195 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 GTF2H4Q92759 462 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 ROPN1LQ96C74 230 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 CCDC167Q9P0B6 97 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 RNF6Q9Y252 685 aa15.72■□□□□ 0.11
MDC1-206ENST00000489540 NUP214P35658 2090 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms