RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ACTL6AO96019 429 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 CCDC166P0CW27 439 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 KRT13P13646 458 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 PAICSP22234 425 aaKnown RBP2.39□□□□□ -2.03
RFC4-213ENST00000489028 DPP4P27487 766 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 PTPN6P29350 595 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 AXLP30530 894 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 ZNF133P52736 654 aaPredicted RBP2.39□□□□□ -2.03
RFC4-213ENST00000489028 IL18R1Q13478 541 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 PARP6Q2NL67 630 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 PAGE2BQ5JRK9 111 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 LIPKQ5VXJ0 399 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 UFSP1Q6NVU6 142 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 SCARA5Q6ZMJ2 495 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 DPY19L2P2Q6ZN68 376 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 P4HA3Q7Z4N8 544 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 TSEN54Q7Z6J9 526 aaKnown RBP2.39□□□□□ -2.03
RFC4-213ENST00000489028 RANBP3LQ86VV4 465 aaPredicted RBP2.39□□□□□ -2.03
RFC4-213ENST00000489028 GPBP1Q86WP2 473 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 C14orf178Q8N769 122 aaPredicted RBP2.39□□□□□ -2.03
RFC4-213ENST00000489028 IPMKQ8NFU5 416 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 IMMP1LQ96LU5 166 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 MYCBPQ99417 103 aaPredicted RBP2.39□□□□□ -2.03
RFC4-213ENST00000489028 NT5C3AQ9H0P0 336 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 WDR76Q9H967 626 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 MBD2Q9UBB5 411 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 ATP6V1HQ9UI12 483 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 SNX6Q9UNH7 406 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 FOXJ3Q9UPW0 622 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 MFHAS1Q9Y4C4 1052 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 RAD54L2Q9Y4B4 1467 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 A0A1B0GUL7 405 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 LRIT2A6NDA9 550 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 GPR89AB7ZAQ6 455 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 E9PMD0 336 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 H0YCG3 227 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 SGK494L7N484 410 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 IGSF6O95976 241 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 CA3P07451 260 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 HOXC4P09017 264 aaPredicted RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 GPR89BP0CG08 455 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 EPB41P11171 864 aaKnown RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 CYP11B1P15538 503 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 PSMB1P20618 241 aaKnown RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 PTBP1P26599 531 aaKnown RBP eCLIP2.38□□□□□ -2.03
RFC4-213ENST00000489028 PSMA5P28066 241 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 HTR2AP28223 471 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ADRA1AP35348 466 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ACVR1BP36896 505 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 OR3A4PP47883 348 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 DIO3P55073 304 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 RPS8P62241 208 aaKnown RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 HMGN5P82970 282 aaKnown RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 FUT7Q11130 342 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 PSG7Q13046 419 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ZSWIM7Q19AV6 140 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ADPRMQ3LIE5 342 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 SLC36A3Q495N2 470 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ACSF3Q4G176 576 aaPredicted RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 ZNF311Q5JNZ3 666 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ATAD3BQ5T9A4 648 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 LGSNQ5TDP6 509 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 KDELC1Q6UW63 502 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 PAQR9Q6ZVX9 377 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ARMCX2Q7L311 632 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ERICH1Q86X53 443 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 C9orf40Q8IXQ3 194 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 GCNT2Q8N0V5 402 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 FADS6Q8N9I5 356 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 STKLD1Q8NE28 680 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 WDR36Q8NI36 951 aaKnown RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 CCDC51Q96ER9 411 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 TSPAN18Q96SJ8 248 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 ZNF184Q99676 751 aaPredicted RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 CRACR2AQ9BSW2 395 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 TSSK1BQ9BXA7 367 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 POLD4Q9HCU8 107 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 P2RX2Q9UBL9 471 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 EXTL2Q9UBQ6 330 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 TBK1Q9UHD2 729 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 XPO7Q9UIA9 1087 aaKnown RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 MRPS7Q9Y2R9 242 aaKnown RBP2.38□□□□□ -2.03
RFC4-213ENST00000489028 FLVCR1Q9Y5Y0 555 aa2.38□□□□□ -2.03
RFC4-213ENST00000489028 A0A0U1RQV5 110 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 CLRN2A0PK11 232 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 H3BMH7 237 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 H3BTX0 84 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 MAGEB3O15480 346 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 TBX19O60806 448 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 STK17BO94768 372 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 RHOBTB1O94844 696 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 TOXO94900 526 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 OR4F21O95013 312 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 ANP32DO95626 131 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 IGLV1-47P01700 117 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 IGHDP01880 384 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 SLC35G4P0C7Q5 338 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 ZCCHC18P0CG32 403 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 HNRNPA2B1P22626 353 aaKnown RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 OTX2P32243 289 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms