RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ZNF311Q5JNZ3 666 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 SLC22A10Q63ZE4 541 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 IGFL2Q6UWQ7 119 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF836Q6ZNA1 936 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 MARCH3Q86UD3 253 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF227Q86WZ6 799 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 SMYD1Q8NB12 490 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 POGLUT1Q8NBL1 392 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 MDS2Q8NDY4 140 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 CATSPER1Q8NEC5 780 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 C9orf43Q8TAL5 461 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-209ENST00000488860 PHOSPHO1Q8TCT1 267 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 PAQR8Q8TEZ7 354 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 TAMM41Q96BW9 452 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 ZG16BQ96DA0 208 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 ASB9Q96DX5 294 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 SGCZQ96LD1 299 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 LRGUKQ96M69 825 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 NSMCE2Q96MF7 247 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 JSRP1Q96MG2 331 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-209ENST00000488860 RAB3IPQ96QF0 476 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-209ENST00000488860 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 MTHFD2LQ9H903 347 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF71Q9NQZ8 489 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-209ENST00000488860 SLC7A8Q9UHI5 535 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 KCNE5Q9UJ90 142 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 CNOT11Q9UKZ1 510 aaKnown RBP11.29□□□□□ -0.6
TRAIP-209ENST00000488860 ABCG2Q9UNQ0 655 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 DTNAQ9Y4J8 743 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 HEATR5AQ86XA9 2040 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 PCNX3Q9H6A9 2034 aa11.29□□□□□ -0.6
TRAIP-209ENST00000488860 ACACBO00763 2458 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 A0A1W2PRS3 328 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 AGAP5A6NIR3 686 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CLDN24A6NM45 220 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 C17orf51A8MQB3 221 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ANKRD65E5RJM6 399 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 NPIPB9F8W1W9 429 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 H3BNH8 94 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 M0QX08 132 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 NDUFB5O43674 189 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 FADS1O60427 444 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 GCM2O75603 506 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ANGPTL1O95841 491 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 IFNA14P01570 189 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 GUSBP08236 651 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CD46P15529 392 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 TBXA2RP21731 343 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CASP3P42574 277 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 MASP1P48740 699 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 DNASE1L1P49184 302 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 TNFSF10P50591 281 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 RHDQ02161 417 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 DMTNQ08495 405 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 TRIM25Q14258 630 aaKnown RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CD226Q15762 336 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF141Q15928 474 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CYBRD1Q53TN4 286 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF766Q5HY98 468 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 APOOLQ6UXV4 268 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CCDC80Q76M96 950 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 DHFR2Q86XF0 187 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 PTRH1Q86Y79 214 aaKnown RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 HAS2Q92819 552 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 SH3YL1Q96HL8 342 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 TPD52L3Q96J77 140 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 SECISBP2Q96T21 854 aaKnown RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 DOHHQ9BU89 302 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 TRIM15Q9C019 465 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 MMADHCQ9H3L0 296 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 MUC13Q9H3R2 512 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 SH2D2AQ9NP31 389 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ADPRHL2Q9NX46 363 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CNIH4Q9P003 139 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 SLC13A4Q9UKG4 626 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF232Q9UNY5 417 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 KLF13Q9Y2Y9 288 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-209ENST00000488860 IFT52Q9Y366 437 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 PCDHGB7Q9Y5F8 929 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 WIF1Q9Y5W5 379 aa11.28□□□□□ -0.6
TRAIP-209ENST00000488860 CNTRLQ7Z7A1 2325 aa11.27□□□□□ -0.6
TRAIP-209ENST00000488860 ZZEF1O43149 2961 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 SERINC4A6NH21 518 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 GTPBP1O00178 669 aaKnown RBP11.27□□□□□ -0.61
TRAIP-209ENST00000488860 CDK2AP1O14519 115 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 GNB5O14775 395 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 DPM1O60762 260 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 MFN2O95140 757 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 CSTAP01040 98 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 THBS1P07996 1170 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 SP1P08047 785 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 NGFRP08138 427 aa11.27□□□□□ -0.61
TRAIP-209ENST00000488860 UBTFL6P0CB48 400 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms