RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SIRT3Q9NTG7 399 aaPredicted RBP17.89■□□□□ 0.45
CCM2-216ENST00000488727 NBEAQ8NFP9 2946 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 PLOD3O60568 738 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 KRT75O95678 551 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 ETFAP13804 333 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 IL7RP16871 459 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 CRATP43155 626 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 SELENOWP63302 87 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 ZNF630Q2M218 657 aaPredicted RBP17.88■□□□□ 0.45
CCM2-216ENST00000488727 COX20Q5RI15 118 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 B3GNTL1Q67FW5 361 aaPredicted RBP17.88■□□□□ 0.45
CCM2-216ENST00000488727 FCRLBQ6BAA4 426 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 LAIR2Q6ISS4 152 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 H3F3CQ6NXT2 135 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 FAHD1Q6P587 224 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 SLC30A8Q8IWU4 369 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 OR5P2Q8WZ92 322 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 TTC9Q92623 222 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 MAL2Q969L2 176 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 BARD1Q99728 777 aaKnown RBP17.88■□□□□ 0.45
CCM2-216ENST00000488727 OR10A5Q9H207 317 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 EPS8L2Q9H6S3 715 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 ZNF552Q9H707 407 aaPredicted RBP17.88■□□□□ 0.45
CCM2-216ENST00000488727 GPR83Q9NYM4 423 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 DTX4Q9Y2E6 619 aa17.88■□□□□ 0.45
CCM2-216ENST00000488727 SAMHD1Q9Y3Z3 626 aaKnown RBP17.88■□□□□ 0.45
CCM2-216ENST00000488727 TNRC6AQ8NDV7 1962 aaKnown RBP17.87■□□□□ 0.45
CCM2-216ENST00000488727 TRIM64BA6NI03 449 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 TMEM200CA6NKL6 621 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 MAN1A2O60476 641 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 NME6O75414 186 aaPredicted RBP17.87■□□□□ 0.45
CCM2-216ENST00000488727 SLITRK5O94991 958 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 CCDC159P0C7I6 412 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 GPC1P35052 558 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 RNF4P78317 190 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 TUBA3CQ13748 450 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 MEP1AQ16819 746 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 JMJD6Q6NYC1 403 aaPredicted RBP17.87■□□□□ 0.45
CCM2-216ENST00000488727 HSDL2Q6YN16 418 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 OR2L13Q8N349 312 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 OR7G1Q8NGA0 311 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 OR52R1Q8NGF1 315 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 OR13F1Q8NGS4 319 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 PSMA8Q8TAA3 256 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 THAP3Q8WTV1 239 aaPredicted RBP17.87■□□□□ 0.45
CCM2-216ENST00000488727 MAGED4Q96JG8 741 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 PTGFRNQ9P2B2 879 aa17.87■□□□□ 0.45
CCM2-216ENST00000488727 A0A087WV62 115 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 E9PQ18 207 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 ARAFP10398 606 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 UQCRC2P22695 453 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 POLR2IP36954 125 aaKnown RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 SCARB2Q14108 478 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 C16orf52Q8NHV5 167 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 C12orf43Q96C57 262 aaKnown RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 TPD52L3Q96J77 140 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 DEFB126Q9BYW3 111 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 CXorf36Q9H7Y0 433 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 LIN28AQ9H9Z2 209 aaKnown RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 THUMPD1Q9NXG2 353 aaKnown RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 PDP1Q9P0J1 537 aaPredicted RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 C19orf53Q9UNZ5 99 aaPredicted RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 CACNA1BQ00975 2339 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 SLC1A7O00341 560 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 MITFO75030 526 aaPredicted RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 DIRAS1O95057 198 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 EEF1B2P24534 225 aaKnown RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 EMDP50402 254 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 EBPQ15125 230 aaKnown RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 CRB2Q5IJ48 1285 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 XAF1Q6GPH4 301 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 TCTN3Q6NUS6 607 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 C16orf47Q6ZP98 133 aaPredicted RBP17.86■□□□□ 0.45
CCM2-216ENST00000488727 OR8K3Q8NH51 312 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 ADNPQ9H2P0 1102 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 NEUROD4Q9HD90 331 aa17.86■□□□□ 0.45
CCM2-216ENST00000488727 M0QX08 132 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 PRAMEF2O60811 474 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 SEC14L2O76054 403 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 ZFAND5O76080 213 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 IFI6P09912 130 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 FAM87AP0C7U9 286 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 CHI3L1P36222 383 aaPredicted RBP17.85■□□□□ 0.45
CCM2-216ENST00000488727 PCBP3P57721 371 aaKnown RBP17.85■□□□□ 0.45
CCM2-216ENST00000488727 IFI44LQ53G44 452 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 DHRS4L2Q6PKH6 230 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 ANGPTL8Q6UXH0 198 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 TSEN54Q7Z6J9 526 aaKnown RBP17.85■□□□□ 0.45
CCM2-216ENST00000488727 ARMC10Q8N2F6 343 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 ZNF347Q96SE7 839 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 PITX2Q99697 317 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 WWTR1Q9GZV5 400 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 PCDHGB3Q9Y5G1 929 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 PCDHGA9Q9Y5G4 932 aaKnown RBP17.85■□□□□ 0.45
CCM2-216ENST00000488727 SNX8Q9Y5X2 465 aa17.85■□□□□ 0.45
CCM2-216ENST00000488727 OR6C76A6NM76 312 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 ADAMDEC1O15204 470 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 IFNA14P01570 189 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 CLK3P49761 638 aaKnown RBP17.84■□□□□ 0.45
CCM2-216ENST00000488727 NUP107P57740 925 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms