RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
MCF2L-228ENST00000487354 TMCO1Q9UM00 188 aa13.64□□□□□ -0.23
MCF2L-228ENST00000487354 JUNP05412 331 aaKnown RBP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 RBP1P09455 135 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 PTNP21246 168 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 TIA1P31483 386 aaKnown RBP eCLIP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 MAP3K8P41279 467 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 C17orf67Q0P5P2 114 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 ZNF239Q16600 458 aaKnown RBP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 C11orf71Q6IPW1 123 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 GALNT18Q6P9A2 607 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 ESPNLQ6ZVH7 1005 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 WDR75Q8IWA0 830 aaKnown RBP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 CDYL2Q8N8U2 506 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 ROBO4Q8WZ75 1007 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 RNF145Q96MT1 663 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 SRXN1Q9BYN0 137 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 ESRP2Q9H6T0 727 aaKnown RBP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-228ENST00000487354 SENP1Q9P0U3 644 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 B3GALT5Q9Y2C3 310 aa13.63□□□□□ -0.23
MCF2L-228ENST00000487354 UQCRHLA0A096LP55 91 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 A0A1W2PRB8 838 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 ZNF814B7Z6K7 855 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 ALG1L2C9J202 215 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 SSX4O60224 188 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 SMIM24O75264 130 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 DDCP20711 480 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 EDNRAP25101 427 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 MPIP34949 423 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 HSD17B3P37058 310 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 RFX3P48380 749 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 NCBP2P52298 156 aaKnown RBP eCLIP13.62□□□□□ -0.23
MCF2L-228ENST00000487354 RAC1P63000 192 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 VLDLRP98155 873 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 HEPACAMQ14CZ8 416 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 UAP1Q16222 522 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-228ENST00000487354 ZAR1Q86SH2 424 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 STK32CQ86UX6 486 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 PIK3R3Q92569 461 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 HS6ST2Q96MM7 605 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 TNFRSF13CQ96RJ3 184 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 NAPGQ99747 312 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-228ENST00000487354 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 POTEKPQ9BYX7 375 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 TBL1XR1Q9BZK7 514 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 GLIPR2Q9H4G4 154 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 BARX1Q9HBU1 254 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-228ENST00000487354 Q9N2J8 555 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 FANCFQ9NPI8 374 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 GIMAP4Q9NUV9 329 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 MED17Q9NVC6 651 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 NMRK1Q9NWW6 199 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 NPAP1Q9NZP6 1156 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 KLHL13Q9P2N7 655 aa13.62□□□□□ -0.23
MCF2L-228ENST00000487354 ING1Q9UK53 422 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-228ENST00000487354 A0A087WZY1 265 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 GNG14A0A1W2PPG7 69 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 FAM234BA2RU67 622 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ELOA3DA6NLF2 546 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-228ENST00000487354 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 GOLGA8RI6L899 631 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 EFNA2O43921 213 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 SYNGR4O95473 234 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 OXSR1O95747 527 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ADAP00813 363 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 PAFAH1B1P43034 410 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 C21orf58P58505 322 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 CLCQ05315 142 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 LOXL1Q08397 574 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-228ENST00000487354 C2orf54Q08AI8 447 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ELOA3BQ3SY89 546 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 UNC50Q53HI1 259 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 SPIN4Q56A73 249 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 HBMQ6B0K9 141 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 TUSC5Q8IXB3 177 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ARIH2OSQ8N7S6 290 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 BANPQ8N9N5 519 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ELOA3Q8NG57 546 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 OR4C3Q8NH37 302 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 OSTF1Q92882 214 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ZBTB8AQ96BR9 441 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ELP4Q96EB1 424 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 AMDHD1Q96NU7 426 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 BBS4Q96RK4 519 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 SHCBP1LQ9BZQ2 653 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 SIRT5Q9NXA8 310 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 CISD1Q9NZ45 108 aaKnown RBP13.61□□□□□ -0.23
MCF2L-228ENST00000487354 ARFGEF3Q5TH69 2177 aa13.61□□□□□ -0.23
MCF2L-228ENST00000487354 SLITRK5O94991 958 aa13.6□□□□□ -0.23
MCF2L-228ENST00000487354 NGFRP08138 427 aa13.6□□□□□ -0.23
MCF2L-228ENST00000487354 LINGO3P0C6S8 592 aa13.6□□□□□ -0.23
MCF2L-228ENST00000487354 ZNF16P17020 682 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms