RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 GABRA3P34903 492 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 IDUAP35475 653 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 MFSD12Q6NUT3 480 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 PODNL1Q6PEZ8 512 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 STEAP2Q8NFT2 490 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 OR2V1Q8NHB1 315 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 DCAKDQ8WVC6 231 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 FBXW5Q969U6 566 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 AMDHD1Q96NU7 426 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 KCNA7Q96RP8 456 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 CDC42EP4Q9H3Q1 356 aaKnown RBP17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 MIEF1Q9NQG6 463 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 TAS2R7Q9NYW3 318 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 TIMM22Q9Y584 194 aa17.35■□□□□ 0.37
SMPDL3A-202ENST00000487215 A0A087WZY1 265 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 A0A0J9YW62 118 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 POC1B-GALNT4F8VUJ3 575 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 TLX2O43763 284 aaPredicted RBP17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 CD5LO43866 347 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 DLX3O60479 287 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 KCNH1O95259 989 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 TAC1P20366 129 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 PSMA4P25789 261 aaKnown RBP17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 NTSP30990 170 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 ACVR1BP36896 505 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 CDKN1AP38936 164 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 RAC1P63000 192 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 WHAMMP3Q1A5X7 153 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 NCMAPQ5T1S8 102 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 FAM71E1Q6IPT2 247 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 ESPNLQ6ZVH7 1005 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 HIPK1Q86Z02 1210 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 PIK3R3Q92569 461 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 NEUROG1Q92886 237 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 GTPBP3Q969Y2 492 aaKnown RBP17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 RNF145Q96MT1 663 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 SLCO5A1Q9H2Y9 848 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 TMEM185BQ9H7F4 350 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 C3orf14Q9HBI5 128 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 YAE1D1Q9NRH1 226 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 ZNF180Q9UJW8 692 aa17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 MAGED1Q9Y5V3 778 aaPredicted RBP17.34■□□□□ 0.37
SMPDL3A-202ENST00000487215 A0A1W2PRB8 838 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 C7orf72A4D263 438 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 ALG1L2C9J202 215 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 GCM2O75603 506 aaPredicted RBP17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 IFNA2P01563 188 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 ENO1P06733 434 aaKnown RBP17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 TSC22D1Q15714 1073 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 PLPPR5Q32ZL2 321 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 SPDYAQ5MJ70 313 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 HBMQ6B0K9 141 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 GABRG1Q8N1C3 465 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 C17orf53Q8N3J3 647 aaPredicted RBP17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 GATSQ8NAP1 163 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 SMAP2Q8WU79 429 aaPredicted RBP17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZBTB8AQ96BR9 441 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 MYNNQ9NPC7 610 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 MED17Q9NVC6 651 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 TMEM216Q9P0N5 145 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 LIPT1Q9Y234 373 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 STK38LQ9Y2H1 464 aa17.33■□□□□ 0.36
SMPDL3A-202ENST00000487215 CR1P17927 2039 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 SERTM1A2A2V5 107 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 TTC36A6NLP5 189 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 NDUFB5O43674 189 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 OXSR1O95747 527 aaPredicted RBP17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 IGHV4-39P01824 125 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 CD3EP07766 207 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 THBS1P07996 1170 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 IMPDH1P20839 514 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 PKNOX1P55347 436 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 LCP2Q13094 533 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 TAB1Q15750 504 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 FIGNL1Q6PIW4 674 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 DNM1P46Q6ZS02 220 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 ATG4DQ86TL0 474 aaPredicted RBP17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 EXOC3L1Q86VI1 746 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 CEP112Q8N8E3 955 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 MNS1Q8NEH6 495 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 OR4C3Q8NH37 302 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 GPR151Q8TDV0 419 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 KLHDC3Q9BQ90 382 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 EQTNQ9NQ60 294 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 FBXO34Q9NWN3 711 aa17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 POLR3HQ9Y535 204 aaPredicted RBP17.32■□□□□ 0.36
SMPDL3A-202ENST00000487215 CCDC151A5D8V7 595 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 URI1O94763 535 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 NTN1O95631 604 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 NGFRP08138 427 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 IFI6P09912 130 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ATP5F1P24539 256 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 MAP3K8P41279 467 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 SLC18A2Q05940 514 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 SLC29A2Q14542 456 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZNF672Q499Z4 452 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 PDSS1Q5T2R2 415 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 CPTPQ5TA50 214 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 GTF2IRD2BQ6EKJ0 949 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms