RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 PLPPR5Q32ZL2 321 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 C11orf71Q6IPW1 123 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 NUFIP2Q7Z417 695 aaKnown RBP17.11■□□□□ 0.33
CHRD-216ENST00000486066 C19orf24Q9BVV8 132 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 ACPTQ9BZG2 426 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 TAS2R7Q9NYW3 318 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 B3GALT5Q9Y2C3 310 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 SNX8Q9Y5X2 465 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 TNFSF11O14788 317 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 ZSCAN12O43309 604 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 RAMP1O60894 148 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 OR4F21O95013 312 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 ESRRBO95718 433 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 NGFRP08138 427 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 IFI6P09912 130 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 TSPAN8P19075 237 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 HEPACAMQ14CZ8 416 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 TRADDQ15628 312 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 ZNF239Q16600 458 aaKnown RBP17.1■□□□□ 0.33
CHRD-216ENST00000486066 NRF1Q16656 503 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 SH2D4BQ5SQS7 431 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 ZBTB8AQ96BR9 441 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 APIPQ96GX9 242 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 HS6ST2Q96MM7 605 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 POTEKPQ9BYX7 375 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 Q9N2J8 555 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 NGBQ9NPG2 151 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 STOML1Q9UBI4 398 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
CHRD-216ENST00000486066 A0A1W2PRB8 838 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 A8MT66 165 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 ZNF814B7Z6K7 855 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 NTN1O95631 604 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 DDCP20711 480 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 TIA1P31483 386 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHRD-216ENST00000486066 HSD17B3P37058 310 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 PLTPP55058 493 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 IRX1P78414 480 aaPredicted RBP17.09■□□□□ 0.33
CHRD-216ENST00000486066 UBAP2Q5T6F2 1119 aaKnown RBP17.09■□□□□ 0.33
CHRD-216ENST00000486066 CPTPQ5TA50 214 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 PPP4R4Q6NUP7 873 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 TMEM107Q6UX40 140 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 ABHD3Q8WU67 409 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 USB1Q9BQ65 265 aaKnown RBP17.09■□□□□ 0.33
CHRD-216ENST00000486066 RHNO1Q9BSD3 238 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 TBL1XR1Q9BZK7 514 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 VPS11Q9H270 941 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 GP6Q9HCN6 339 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 GIMAP4Q9NUV9 329 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 MED17Q9NVC6 651 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 KLHL13Q9P2N7 655 aa17.09■□□□□ 0.33
CHRD-216ENST00000486066 DMGDHQ9UI17 866 aaKnown RBP17.09■□□□□ 0.33
CHRD-216ENST00000486066 ING1Q9UK53 422 aaPredicted RBP17.09■□□□□ 0.33
CHRD-216ENST00000486066 GXYLT2A0PJZ3 443 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 SSX4O60224 188 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 SYNGR4O95473 234 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 OPN1LWP04000 364 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 JUNP05412 331 aaKnown RBP17.08■□□□□ 0.32
CHRD-216ENST00000486066 SHC1P29353 583 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 GSTM5P46439 218 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 CLK3P49761 638 aaKnown RBP17.08■□□□□ 0.32
CHRD-216ENST00000486066 HTR6P50406 440 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 P2RY6Q15077 328 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 SPIN4Q56A73 249 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 HBMQ6B0K9 141 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 TRABD2AQ86V40 505 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 TDRPQ86YL5 185 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 ZNF619Q8N2I2 560 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 ROBO4Q8WZ75 1007 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 ELP4Q96EB1 424 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 RNF145Q96MT1 663 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 SRXN1Q9BYN0 137 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 GLIPR2Q9H4G4 154 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 CISD1Q9NZ45 108 aaKnown RBP17.08■□□□□ 0.32
CHRD-216ENST00000486066 SENP1Q9P0U3 644 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 LPAR3Q9UBY5 353 aa17.08■□□□□ 0.32
CHRD-216ENST00000486066 FAM234BA2RU67 622 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 EFNA2O43921 213 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 GMFGO60234 142 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 SMIM24O75264 130 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 OXSR1O95747 527 aaPredicted RBP17.07■□□□□ 0.32
CHRD-216ENST00000486066 LINGO3P0C6S8 592 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 PSMD4P55036 377 aaKnown RBP17.07■□□□□ 0.32
CHRD-216ENST00000486066 CASP9P55211 416 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 CAV1Q03135 178 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 CLCQ05315 142 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 ITGADQ13349 1161 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 GTF2IRD2BQ6EKJ0 949 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 ALKBH2Q6NS38 261 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 GTF2IRD2Q86UP8 949 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 CCDC25Q86WR0 208 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 TUSC5Q8IXB3 177 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 CDYL2Q8N8U2 506 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 OR4C3Q8NH37 302 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 SLC9A6Q92581 669 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 OSTF1Q92882 214 aa17.07■□□□□ 0.32
CHRD-216ENST00000486066 MRRFQ96E11 262 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms