RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 OR6B1O95007 311 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 C8BP07358 591 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 NUDT7P0C024 238 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 ABOP16442 354 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 ATP6V1B2P21281 511 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 S1PR1P21453 382 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 SCARB2Q14108 478 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 GNA13Q14344 377 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 ZNF267Q14586 743 aaPredicted RBP15.62■□□□□ 0.09
VIM-205ENST00000485947 HYAL4Q2M3T9 481 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 RNFT1Q5M7Z0 435 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 EXOSC6Q5RKV6 272 aaKnown RBP15.62■□□□□ 0.09
VIM-205ENST00000485947 ARHGAP11AQ6P4F7 1023 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 AAGABQ6PD74 315 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 RNF111Q6ZNA4 994 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 SLC22A16Q86VW1 577 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 HIPK4Q8NE63 616 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 C17orf47Q8NEP4 570 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 OR52R1Q8NGF1 315 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 ADAMTS15Q8TE58 950 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 FIG4Q92562 907 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 CCDC120Q96HB5 630 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 OR7D2Q96RA2 312 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 STACQ99469 402 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 RUBCNLQ9H714 662 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 SACM1LQ9NTJ5 587 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 ANGPT4Q9Y264 503 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 CFL2Q9Y281 166 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 TCRBV3S1A0A5B6 114 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 E9PLN8 166 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ENTPD5O75356 428 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 P04436 131 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 OR12D1P0DN82 309 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 UMPSP11172 480 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 NCK1P16333 377 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 MAN2A2P49641 1150 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ST13P50502 369 aaKnown RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 SLC37A1P57057 533 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 RPS26P62854 115 aaKnown RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 CDK6Q00534 326 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 EXOSC7Q15024 291 aaKnown RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 C3AR1Q16581 482 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ZNF791Q3KP31 576 aaPredicted RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 ATAD3BQ5T9A4 648 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 PRAMEF8Q5VWM4 474 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 PRAMEF7Q5VXH5 474 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ZFP1Q6P2D0 407 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 CYP2R1Q6VVX0 501 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 CCDC80Q76M96 950 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 SPATA24Q86W54 205 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 C9orf40Q8IXQ3 194 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 TAGAPQ8N103 731 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ZNF321PQ8N8H1 164 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 OR2M7Q8NG81 312 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ITLN2Q8WWU7 325 aaPredicted RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 HOXB13Q92826 284 aaPredicted RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 FAM162AQ96A26 154 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 DUS3LQ96G46 650 aaKnown RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 RSRC1Q96IZ7 334 aaKnown RBP15.61■□□□□ 0.09
VIM-205ENST00000485947 VKORC1Q9BQB6 163 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 CNPPD1Q9BV87 410 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 PIGUQ9H490 435 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ZDHHC11Q9H8X9 412 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ANKRA2Q9H9E1 313 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 CHST11Q9NPF2 352 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 EQTNQ9NQ60 294 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 DUSP22Q9NRW4 184 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 EXD2Q9NVH0 621 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 CALML5Q9NZT1 146 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 CNIH4Q9P003 139 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 PRODH2Q9UF12 536 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 ERVK-19Q9WJR5 959 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 LIPT1Q9Y234 373 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 MEMO1Q9Y316 297 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 PCDHGB3Q9Y5G1 929 aa15.61■□□□□ 0.09
VIM-205ENST00000485947 C5orf58C9J3I9 102 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 AK1P00568 194 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 ALOX5P09917 674 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 HOXB6P17509 224 aaKnown RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 PTGS2P35354 604 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 DCTP40126 519 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 MAP3K8P41279 467 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 CASP9P55211 416 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 ZNF155Q12901 538 aaPredicted RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 ZNHIT3Q15649 155 aaPredicted RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 CMPK2Q5EBM0 449 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 SLC22A10Q63ZE4 541 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 REEP3Q6NUK4 255 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 C16orf47Q6ZP98 133 aaPredicted RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 MRGPRGQ86SM5 289 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 CHERPQ8IWX8 916 aaKnown RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 OR5D16Q8NGK9 328 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 NFKBIDQ8NI38 313 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 SLC26A7Q8TE54 656 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 PAQR8Q8TEZ7 354 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 XAGE5Q8WWM1 108 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 SPACA9Q96E40 222 aaPredicted RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 RNF145Q96MT1 663 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 LMF2Q9BU23 707 aaKnown RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 TSPAN10Q9H1Z9 355 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms