RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 NDUFB5O43674 189 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 PEX11AO75192 247 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 AQP8O94778 261 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 SLU7O95391 586 aaKnown RBP16.69■□□□□ 0.26
CLK1-211ENST00000481641 CRHP06850 196 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 ASMTP46597 345 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 FOXD4Q12950 439 aaPredicted RBP16.69■□□□□ 0.26
CLK1-211ENST00000481641 TMEM44Q2T9K0 475 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 GLYR1Q49A26 553 aaPredicted RBP16.69■□□□□ 0.26
CLK1-211ENST00000481641 PPP4R4Q6NUP7 873 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 GGNQ86UU5 652 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLK1-211ENST00000481641 JADE3Q92613 823 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 MBD6Q96DN6 1003 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 FAM120BQ96EK7 910 aaKnown RBP16.69■□□□□ 0.26
CLK1-211ENST00000481641 SH3YL1Q96HL8 342 aaPredicted RBP16.69■□□□□ 0.26
CLK1-211ENST00000481641 ALPK1Q96QP1 1244 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 C1orf50Q9BV19 199 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 RNF122Q9H9V4 155 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 KLHL28Q9NXS3 571 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 C6orf203Q9P0P8 240 aaPredicted RBP16.69■□□□□ 0.26
CLK1-211ENST00000481641 NDRG3Q9UGV2 375 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 ATP6V1HQ9UI12 483 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 EDARQ9UNE0 448 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 TESMINQ9Y4I5 508 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 AP4B1Q9Y6B7 739 aa16.69■□□□□ 0.26
CLK1-211ENST00000481641 ALG1L2C9J202 215 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 LINC01387J3KSC0 135 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 EIF1AYO14602 144 aaKnown RBP16.68■□□□□ 0.26
CLK1-211ENST00000481641 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
CLK1-211ENST00000481641 SIAH2O43255 324 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 CGAP01215 116 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 ALOX5P09917 674 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 NUDT17P0C025 328 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 LAMP1P11279 417 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 TBXA2RP21731 343 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 CD79BP40259 229 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 SLC6A8P48029 635 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 RNF144AP50876 292 aaPredicted RBP16.68■□□□□ 0.26
CLK1-211ENST00000481641 PPP2R2AP63151 447 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 ADAM8P78325 824 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 IFFO1Q0D2I5 559 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 SGCBQ16585 318 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 DEFB113Q30KQ7 82 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 EXOSC6Q5RKV6 272 aaKnown RBP16.68■□□□□ 0.26
CLK1-211ENST00000481641 METTL25Q8N6Q8 603 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 COX18Q8N8Q8 333 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 ZNF610Q8N9Z0 462 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 MTERF3Q96E29 417 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 CHMP6Q96FZ7 201 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 EML4Q9HC35 981 aaKnown RBP16.68■□□□□ 0.26
CLK1-211ENST00000481641 ZCCHC3Q9NUD5 404 aaKnown RBP16.68■□□□□ 0.26
CLK1-211ENST00000481641 LGALS13Q9UHV8 139 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 ZDHHC2Q9UIJ5 367 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 CLEC4AQ9UMR7 237 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 ZNF175Q9Y473 711 aa16.68■□□□□ 0.26
CLK1-211ENST00000481641 SKAP2O75563 359 aaPredicted RBP16.67■□□□□ 0.26
CLK1-211ENST00000481641 HMGN2P05204 90 aaKnown RBP16.67■□□□□ 0.26
CLK1-211ENST00000481641 CCKARP32238 428 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 HPCAL1P37235 193 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 EIF1AXP47813 144 aaKnown RBP16.67■□□□□ 0.26
CLK1-211ENST00000481641 RPS3AP61247 264 aaKnown RBP16.67■□□□□ 0.26
CLK1-211ENST00000481641 LASP1Q14847 261 aaKnown RBP16.67■□□□□ 0.26
CLK1-211ENST00000481641 PTGR1Q14914 329 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLK1-211ENST00000481641 XKR7Q5GH72 579 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 ZNF550Q7Z398 422 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 R3HCC1LQ7Z5L2 792 aaKnown RBP16.67■□□□□ 0.26
CLK1-211ENST00000481641 CAMKMTQ7Z624 323 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 RIBC1Q8N443 379 aaPredicted RBP16.67■□□□□ 0.26
CLK1-211ENST00000481641 KRTCAP2Q8N6L1 136 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 OR6Y1Q8NGX8 325 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 CDS1Q92903 461 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 PPP3R2Q96LZ3 170 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 GIN1Q9NXP7 522 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 SNX8Q9Y5X2 465 aa16.67■□□□□ 0.26
CLK1-211ENST00000481641 FLNAP21333 2647 aaKnown RBP16.66■□□□□ 0.26
CLK1-211ENST00000481641 NPIPA5A0A0B4J1W7 369 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 A0A1W2PRB8 838 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 TMEM114B3SHH9 223 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 NPIPA7E9PJI5 369 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 GOSR1O95249 250 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 NGFRP08138 427 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 NPIPA8P0DM63 369 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 POU2F1P14859 743 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 CD53P19397 219 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 KCNJ5P48544 419 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 PRIM2P49643 509 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 POU6F2P78424 691 aaPredicted RBP16.66■□□□□ 0.26
CLK1-211ENST00000481641 GUSBP1Q15486 140 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 CD226Q15762 336 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 C6orf136Q5SQH8 315 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 ANKRD34AQ69YU3 496 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 LRIG3Q6UXM1 1119 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 C22orf34Q6ZV56 151 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 WFDC11Q8NEX6 87 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 RNF145Q96MT1 663 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 GSX1Q9H4S2 264 aaPredicted RBP16.66■□□□□ 0.26
CLK1-211ENST00000481641 TMEM185BQ9H7F4 350 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 CXorf36Q9H7Y0 433 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms