RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 KLHL26Q53HC5 615 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 PDZK1Q5T2W1 519 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 LINC00696Q6ZRV3 163 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 CBLL1Q75N03 491 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 ARMC8Q8IUR7 673 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 MISPQ8IVT2 679 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 PSD4Q8NDX1 1056 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 FAM13CQ8NE31 585 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 FAM71CQ8NEG0 241 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 OR4C3Q8NH37 302 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 OR52P1PQ8NH57 321 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 GRHL3Q8TE85 626 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 SLC35B4Q969S0 331 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 NSMCE2Q96MF7 247 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 OSBPL11Q9BXB4 747 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 TRIM15Q9C019 465 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 QRSL1Q9H0R6 528 aaKnown RBP11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 PCDHAC1Q9H158 963 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 ADNPQ9H2P0 1102 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 EVA1AQ9H8M9 152 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 CACYBPQ9HB71 228 aaKnown RBP11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 TIMMDC1Q9NPL8 285 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 DCAF13Q9NV06 445 aaKnown RBP11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 FLRT3Q9NZU0 649 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 LRFN1Q9P244 771 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 SEC14L3Q9UDX4 400 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF443Q9Y2A4 671 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 USP24Q9UPU5 2620 aa11.5□□□□□ -0.57
TRAPPC12-218ENST00000479897 NINQ8N4C6 2090 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 NPIPA5A0A0B4J1W7 369 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SERINC4A6NH21 518 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 AQP12BA6NM10 295 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 TMEM229AB2RXF0 380 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 NPIPA7E9PJI5 369 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 M0QX08 132 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SLC25A12O75746 678 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 STAMBPO95630 424 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 C8BP07358 591 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 NPIPA8P0DM63 369 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 CCL3P10147 92 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 NCK1P16333 377 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 CD247P20963 164 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 MSX2P35548 267 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 PTGDSP41222 190 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 KCNJ5P48544 419 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 TNFSF10P50591 281 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 EEF1A1P68104 462 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 RHDQ02161 417 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 OC90Q02509 493 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 DMTNQ08495 405 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 FLOT2Q14254 428 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 LARS2Q15031 903 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 OR1C1Q15619 314 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 EIPR1Q53HC9 387 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SLC22A10Q63ZE4 541 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 DESI1Q6ICB0 168 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SLC30A6Q6NXT4 461 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 APOOLQ6UXV4 268 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF836Q6ZNA1 936 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 EIF3MQ7L2H7 374 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 DHFR2Q86XF0 187 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 GRAMD2AQ8IUY3 354 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 AQP12AQ8IXF9 295 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 EXTL1Q92935 676 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 FAM162AQ96A26 154 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZG16BQ96DA0 208 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SCMH1Q96GD3 660 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 PINK1Q9BXM7 581 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 ANGPTL4Q9BY76 406 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SACM1LQ9NTJ5 587 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 RPS6KA6Q9UK32 745 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SAMD4AQ9UPU9 718 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 SLC35A3Q9Y2D2 325 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 WIF1Q9Y5W5 379 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
TRAPPC12-218ENST00000479897 IGLV3-32A0A0A0MS00 114 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 TCRBV5S2A0A599 114 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 CDHR4A6H8M9 788 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 H3BNH8 94 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 NME2P1O60361 137 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 CIB2O75838 187 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 SERPINA1P01009 418 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 OPN1SWP03999 348 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 HPGDP15428 266 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 IL7RP16871 459 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 NME2P22392 152 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 CLK3P49761 638 aaKnown RBP11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 SELENOWP63302 87 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 KCNJ10P78508 379 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 ARG2P78540 354 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 PLAURQ03405 335 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 CD226Q15762 336 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 LINC00303Q3SY05 128 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 CYBRD1Q53TN4 286 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF311Q5JNZ3 666 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 MRPL2Q5T653 305 aaKnown RBP11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 VRK2Q86Y07 508 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 TOR1AIP2Q8NFQ8 470 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms