RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 FAM3CQ92520 227 aa6.28□□□□□ -1.4
GAPVD1-217ENST00000479511 DLX4Q92988 240 aaPredicted RBP6.28□□□□□ -1.4
GAPVD1-217ENST00000479511 COQ2Q96H96 371 aa6.28□□□□□ -1.4
GAPVD1-217ENST00000479511 TTYH2Q9BSA4 534 aa6.28□□□□□ -1.4
GAPVD1-217ENST00000479511 UTP6Q9NYH9 597 aaKnown RBP6.28□□□□□ -1.4
GAPVD1-217ENST00000479511 CDHR2Q9BYE9 1310 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 MYMKA6NI61 221 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 OR52A4PA6NMU1 304 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 ZNF724A8MTY0 619 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 BOLA2-SMG1P6H3BVE0 249 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 EFNA2O43921 213 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 RANBP6O60518 1105 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 CIB2O75838 187 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 B3GAT3O94766 335 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 ECDO95905 644 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 ALPLP05186 524 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 CD48P09326 243 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 ADORA3P0DMS8 318 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 ERVK-10P10266 1014 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 MYOGP15173 224 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 BRCC3P46736 316 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 CEBPDP49716 269 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 PLA2G16P53816 162 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 PRRX1P54821 245 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 ATP5IP56385 69 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 INHBEP58166 350 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 GUCY2DQ02846 1103 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 BEND6Q5SZJ8 279 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 AWAT2Q6E213 333 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 NBPF5PQ86XG9 351 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 OR5T2Q8NGG2 359 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 FBXO25Q8TCJ0 367 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 ART4Q93070 314 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 C6orf106Q9H6K1 298 aaPredicted RBP6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 KLRF1Q9NZS2 232 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 KLK11Q9UBX7 282 aa6.27□□□□□ -1.41
GAPVD1-217ENST00000479511 WDR19Q8NEZ3 1342 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 A0A0A6YYD4 124 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 A0A0J9YVX5 310 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 SMIM1B2RUZ4 78 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 NEDD8-MDP1E9PL57 170 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 BTN3A3O00478 584 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 AP2A2O94973 939 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 ANXA3P12429 323 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 AMD1P17707 334 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 MAGEA5P43359 124 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 NANOS3P60323 173 aaKnown RBP6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 RPS27AP62979 156 aaKnown RBP6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 IZUMO4Q1ZYL8 232 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 SGSM1Q2NKQ1 1148 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 TMEM52BQ4KMG9 183 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 TMEM225Q6GV28 225 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 PRR5LQ6MZQ0 368 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 METAP1DQ6UB28 335 aaPredicted RBP6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 HOGA1Q86XE5 327 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 OR1K1Q8NGR3 316 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 OR6F1Q8NGZ6 308 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 C18orf25Q96B23 403 aaPredicted RBP6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 AMDHD1Q96NU7 426 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 PITPNM3Q9BZ71 974 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 YY1AP1Q9H869 796 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 PIPOXQ9P0Z9 390 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 ICAM5Q9UMF0 924 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 PCDHGB1Q9Y5G3 927 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 ARFGEF2Q9Y6D5 1785 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 ANKRD31Q8N7Z5 1873 aa6.26□□□□□ -1.41
GAPVD1-217ENST00000479511 IGHV4-4A0A075B6R2 117 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 LRIT2A6NDA9 550 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CYB561D2O14569 222 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 DNALI1O14645 258 aaPredicted RBP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 EI24O14681 340 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CASKO14936 926 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CASQ2O14958 399 aaPredicted RBP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 TNFSF12O43508 249 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 DUSP11O75319 330 aaKnown RBP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 IGSF6O95976 241 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CRYAAP02489 173 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 OPN1LWP04000 364 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 IGF1P05019 195 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 PNMTP11086 282 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 GALP22466 123 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 LAP3P28838 519 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 PAX9P55771 341 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 RPL23AP62750 156 aaKnown RBP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 EWSR1Q01844 656 aaKnown RBP eCLIP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 FGL1Q08830 312 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 ARL16Q0P5N6 197 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 UNC50Q53HI1 259 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CELF3Q5SZQ8 465 aaKnown RBP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 ATRAIDQ6UW56 229 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 HACD2Q6Y1H2 254 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CATSPERDQ86XM0 798 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 SYT14Q8NB59 555 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 ICA1LQ8NDH6 482 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 LHX4Q969G2 390 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 SH3YL1Q96HL8 342 aaPredicted RBP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 PLIN2Q99541 437 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 SLC25A51Q9H1U9 297 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 Q9HAA7 133 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CRLF2Q9HC73 371 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms