RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 POLDIP3Q9BY77 421 aaKnown RBP12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF768Q9H5H4 540 aaKnown RBP12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 UCK1Q9HA47 277 aa12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 SDHAF3Q9NRP4 125 aa12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 MKL2Q9ULH7 1088 aa12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 CLCA2Q9UQC9 943 aa12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 CA5BQ9Y2D0 317 aa12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 ENPP4Q9Y6X5 453 aa12.33□□□□□ -0.44
CNKSR3-204ENST00000479339 A0A1B0GUH1 482 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 GABRR3A8MPY1 467 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 TLR5O60602 858 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 PRAMEF2O60811 474 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 EIF3GO75821 320 aaKnown RBP eCLIP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 B3GALT4O96024 378 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 SYPP08247 313 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 TFPIP10646 304 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 PITPNAQ00169 270 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 LRRC74AQ0VAA2 488 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 RGNQ15493 299 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 C18orf21Q32NC0 220 aaPredicted RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 STX12Q86Y82 276 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 PXT1Q8NFP0 134 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 GLYATL2Q8WU03 294 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 MRPL48Q96GC5 212 aaKnown RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 ARHGAP9Q9BRR9 750 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 MTG2Q9H4K7 406 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 WWOXQ9NZC7 414 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 BTNL2Q9UIR0 455 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 PMS2P1A4D2B8 440 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 ARHGEF33A8MVX0 844 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 TEX46H3BTG2 121 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 GABRPO00591 440 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 TAPBPO15533 448 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 IRAK2O43187 625 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 SUSD5O60279 629 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 GALR3O60755 368 aaPredicted RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 PAGE1O75459 146 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 GCM2O75603 506 aaPredicted RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 CLDN9O95484 217 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 ADH1CP00326 375 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF806P0C7X5 589 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 EPB42P16452 691 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF3P17036 446 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 SPI1P17947 270 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 CHI3L1P36222 383 aaPredicted RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 PREPP48147 710 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 XKP51811 444 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 WNT3P56703 355 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 ACSM1Q08AH1 577 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 SLC10A7Q0GE19 358 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 EIF4EBP2Q13542 120 aaPredicted RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 BOP1Q14137 746 aaKnown RBP12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 GGTA1PQ4G0N0 100 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 GSG1LQ6UXU4 331 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 BAIAP2L2Q6UXY1 529 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 CEACAM20Q6UY09 585 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 SVBPQ8N300 66 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF527Q8NB42 609 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 PRDM9Q9NQV7 894 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 SEMA3GQ9NS98 782 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 KCND3Q9UK17 655 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 DHRS7Q9Y394 339 aa12.32□□□□□ -0.44
CNKSR3-204ENST00000479339 A0A1W2PQH9 124 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 SERTM1A2A2V5 107 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 POM121CA8CG34 1229 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 PRR23D1E9PI22 279 aaPredicted RBP12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 GREM1O60565 184 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 ATG12O94817 140 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 SRPRAP08240 638 aaKnown RBP12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 PRSS56P0CW18 603 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 PRR23D2P0DMB1 279 aaPredicted RBP12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 ACP2P11117 423 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 POU3F2P20265 443 aaPredicted RBP12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 TACR1P25103 407 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 ATP5A1P25705 553 aaKnown RBP12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 AQP1P29972 269 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 ATP5C1P36542 298 aaKnown RBP12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 RGS4P49798 205 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 SEC61A1P61619 476 aaKnown RBP12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 IHHQ14623 411 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 XKR6Q5GH73 641 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 AVPI1Q5T686 147 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 FAM69AQ5T7M9 428 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 UNC5DQ6UXZ4 953 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 DEF8Q6ZN54 512 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 TMUB2Q71RG4 321 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 SCD5Q86SK9 330 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 GPR135Q8IZ08 494 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 SPAG16Q8N0X2 631 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 TCEANCQ8N8B7 351 aa12.31□□□□□ -0.44
CNKSR3-204ENST00000479339 HUS1BQ8NHY5 278 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms