RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ANKMY1Q9P2S6 941 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 GIMAP2Q9UG22 337 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 CDH7Q9ULB5 785 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 WDR45Q9Y484 360 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 MMACHCQ9Y4U1 282 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 YTHDF2Q9Y5A9 579 aaKnown RBP1.15□□□□□ -2.23
HPS3-205ENST00000478525 METP08581 1390 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 COL27A1Q8IZC6 1860 aaPredicted RBP1.15□□□□□ -2.23
HPS3-205ENST00000478525 BRWD3Q6RI45 1802 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 PTPRUQ92729 1446 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 MYO16Q9Y6X6 1858 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 FAM189A1O60320 539 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 CRCPO75575 148 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 UQCRC2P22695 453 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 RFC2P35250 354 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 KRT20P35900 424 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 NPY2RP49146 381 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 CACNG7P62955 275 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 ZNF154Q13106 437 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 PTK6Q13882 451 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 METTL23Q86XA0 190 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 C12orf56Q8IXR9 622 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 THNSL1Q8IYQ7 743 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 OR2T33Q8NG76 320 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 SPATA17Q96L03 361 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 TSPAN18Q96SJ8 248 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 CARD6Q9BX69 1037 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 CHIAQ9BZP6 476 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 FAM114A2Q9NRY5 505 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 MTRF1LQ9UGC7 380 aaKnown RBP1.14□□□□□ -2.23
HPS3-205ENST00000478525 ARMCX3Q9UH62 379 aaPredicted RBP1.14□□□□□ -2.23
HPS3-205ENST00000478525 DCDC2Q9UHG0 476 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 NARFQ9UHQ1 456 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 GRIN2DO15399 1336 aa1.14□□□□□ -2.23
HPS3-205ENST00000478525 SFTPBP07988 381 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 SERPINB6P35237 376 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 DHPSP49366 369 aaPredicted RBP1.13□□□□□ -2.23
HPS3-205ENST00000478525 PRPS1P60891 318 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 ZNF699Q32M78 642 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 KCTD11Q693B1 232 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 CWC27Q6UX04 472 aaKnown RBP1.13□□□□□ -2.23
HPS3-205ENST00000478525 DPY19L2P2Q6ZN68 376 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 UCN3Q969E3 161 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 RASL11BQ9BPW5 248 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 MLPHQ9BV36 600 aaPredicted RBP1.13□□□□□ -2.23
HPS3-205ENST00000478525 SPNS1Q9H2V7 528 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 TMEM206Q9H813 350 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 SIRT7Q9NRC8 400 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 DNAJC17Q9NVM6 304 aaKnown RBP1.13□□□□□ -2.23
HPS3-205ENST00000478525 SWAP70Q9UH65 585 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 NUFIP1Q9UHK0 495 aaKnown RBP1.13□□□□□ -2.23
HPS3-205ENST00000478525 SAMD4AQ9UPU9 718 aaKnown RBP1.13□□□□□ -2.23
HPS3-205ENST00000478525 ENTPD4Q9Y227 616 aa1.13□□□□□ -2.23
HPS3-205ENST00000478525 C13orf42A0A1B0GVH6 325 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 ARPC1BO15143 372 aaKnown RBP1.12□□□□□ -2.23
HPS3-205ENST00000478525 BET1O15155 118 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 OR10H3O60404 316 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 THRBP10828 461 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 RPL4P36578 427 aaKnown RBP1.12□□□□□ -2.23
HPS3-205ENST00000478525 SH3BGRP55822 239 aaPredicted RBP1.12□□□□□ -2.23
HPS3-205ENST00000478525 RND3P61587 244 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 CLEC4GQ6UXB4 293 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 UNQ9370/PRO34162Q6UXP9 181 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 Q6ZR03 302 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 MSANTD1Q6ZTZ1 278 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 TUSC5Q8IXB3 177 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 MLKLQ8NB16 471 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 ATAD1Q8NBU5 361 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 OR4A16Q8NH70 328 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 C5orf30Q96GV9 206 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 GPR137Q96N19 417 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 HDHD3Q9BSH5 251 aaPredicted RBP1.12□□□□□ -2.23
HPS3-205ENST00000478525 RNF126Q9BV68 326 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 RNPEPL1Q9HAU8 725 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 MAGEF1Q9HAY2 307 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 MIOXQ9UGB7 285 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 MRPS2Q9Y399 296 aaKnown RBP1.12□□□□□ -2.23
HPS3-205ENST00000478525 UBIAD1Q9Y5Z9 338 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 CABIN1Q9Y6J0 2220 aa1.12□□□□□ -2.23
HPS3-205ENST00000478525 H3BMH7 237 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 CHEK1O14757 476 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 TM9SF1O15321 606 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 MOSP00540 346 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 JCHAINP01591 159 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 MUC1P15941 1255 aaPredicted RBP1.11□□□□□ -2.23
HPS3-205ENST00000478525 CRISP3P54108 245 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 VLDLRP98155 873 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 TFCP2Q12800 502 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 ARFRP1Q13795 201 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 PIGGQ5H8A4 983 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 CASC10Q5T4H9 136 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 NKAIN2Q5VXU1 208 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 OR9A4Q8NGU2 314 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 GIMAP1Q8WWP7 306 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 TMEM37Q8WXS4 190 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 TEX13AQ9BXU3 409 aaPredicted RBP1.11□□□□□ -2.23
HPS3-205ENST00000478525 MAGT1Q9H0U3 335 aa1.11□□□□□ -2.23
HPS3-205ENST00000478525 ZNF430Q9H8G1 570 aaPredicted RBP1.11□□□□□ -2.23
HPS3-205ENST00000478525 EXOSC1Q9Y3B2 195 aaKnown RBP1.11□□□□□ -2.23
HPS3-205ENST00000478525 MAB21L2Q9Y586 359 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms