RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 PM20D2Q8IYS1 436 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 OR10Q1Q8NGQ4 319 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 OR9I1Q8NGQ6 314 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 GOT1L1Q8NHS2 421 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-206ENST00000478214 DTNBP1Q96EV8 351 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 SFXN2Q96NB2 322 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 OR51I1Q9H343 314 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 CENPEQ02224 2701 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 IGLV3-32A0A0A0MS00 114 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 CCDC154A6NI56 674 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 DUXAA6NLW8 204 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 AHRRA9YTQ3 701 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 SCDO00767 359 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 GSNP06396 782 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 OR12D1P0DN82 309 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 HPGDP15428 266 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 CHRNB4P30926 498 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 CHI3L1P36222 383 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-206ENST00000478214 DCTP40126 519 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 ADH7P40394 386 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 CDKN2CP42773 168 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 RNF144AP50876 292 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-206ENST00000478214 B3GALT5-AS1P59052 145 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 CD226Q15762 336 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF630Q2M218 657 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-206ENST00000478214 FLYWCH1Q4VC44 716 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 SP5Q6BEB4 398 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-206ENST00000478214 TNFAIP8L2Q6P589 184 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-206ENST00000478214 SEM1Q6ZVN7 128 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 OLIG3Q7RTU3 272 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 MIER2Q8N344 545 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 MIPOL1Q8TD10 442 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 CA5BP1Q8WTZ4 195 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 ASB5Q8WWX0 329 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 NEURL3Q96EH8 262 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 C1GALT1C1Q96EU7 318 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 THOC1Q96FV9 657 aaKnown RBP14.13□□□□□ -0.15
HMGA1-206ENST00000478214 PANX1Q96RD7 426 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 SDF2Q99470 211 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 SLC35A5Q9BS91 424 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 PTGES2Q9H7Z7 377 aa14.13□□□□□ -0.15
HMGA1-206ENST00000478214 A0A0G2JNJ9 132 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 IL6P05231 212 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 CPN1P15169 458 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 LHX2P50458 406 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 SRYQ05066 204 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.12□□□□□ -0.154e-7■■■□□ 19
HMGA1-206ENST00000478214 RAET1LQ5VY80 246 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 AAGABQ6PD74 315 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 ENPP6Q6UWR7 440 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 ARSKQ6UWY0 536 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF621Q6ZSS3 439 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 CHDHQ8NE62 594 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-206ENST00000478214 OR5M1Q8NGP8 315 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 LILRB4Q8NHJ6 448 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 XAGE5Q8WWM1 108 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 RAB8BQ92930 207 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 SH3YL1Q96HL8 342 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-206ENST00000478214 CCDC28BQ9BUN5 200 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 Q9UFV3 132 aa14.12□□□□□ -0.15
HMGA1-206ENST00000478214 UQCRHLA0A096LP55 91 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 A0A1W2PQD3 144 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 FAM90A27PA6NNH2 459 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 SHISA8B8ZZ34 492 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 NPIPB9F8W1W9 429 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 C19orf84I3L1E1 186 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 TOXO94900 526 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 EPPINO95925 133 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 CHMP24386 653 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 POLR2JP52435 117 aaKnown RBP14.11□□□□□ -0.15
HMGA1-206ENST00000478214 ATP12AP54707 1039 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 LRRC74AQ0VAA2 488 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 GANABQ14697 944 aaKnown RBP14.11□□□□□ -0.15
HMGA1-206ENST00000478214 ARHGAP11BQ3KRB8 267 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 TIGD2Q4W5G0 525 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 KLHL26Q53HC5 615 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 RIPPLY2Q5TAB7 128 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 DNAJC14Q6Y2X3 702 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-206ENST00000478214 C16orf62Q7Z3J2 963 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 RNF130Q86XS8 419 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 MISPQ8IVT2 679 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 TRIML2Q8N7C3 387 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 VPS33AQ96AX1 596 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 TRIB1Q96RU8 372 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 KLHDC3Q9BQ90 382 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 TUBA1CQ9BQE3 449 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 UCK2Q9BZX2 261 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 HOXD1Q9GZZ0 328 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 SLC6A13Q9NSD5 602 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 EXD2Q9NVH0 621 aa14.11□□□□□ -0.15
HMGA1-206ENST00000478214 CRYBG3Q68DQ2 2970 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 FAM234BA2RU67 622 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 OR2M5A3KFT3 312 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 H0Y3Z8 333 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 RFXANKO14593 260 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 OIP5O43482 229 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 FCMRO60667 390 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 EDF1O60869 148 aaKnown RBP14.1□□□□□ -0.15
HMGA1-206ENST00000478214 STX11O75558 287 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 AK1P00568 194 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms