RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ST3GAL2Q16842 350 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 CLEC6AQ6EIG7 209 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 TMUB2Q71RG4 321 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SPICQ8N5J4 248 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ACVR1CQ8NER5 493 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 TSPAN17Q96FV3 270 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 TCF25Q9BQ70 676 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 CACYBPQ9HB71 228 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 NANSQ9NR45 359 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SLAMF8Q9P0V8 285 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 DNAJC15Q9Y5T4 150 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ELOVL7A1L3X0 281 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 LRIT2A6NDA9 550 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 C9JVG2 144 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ITGB1BP1O14713 200 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 GALR3O60755 368 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC19A2O60779 497 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 PRAF2O60831 178 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 AP2A2O94973 939 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 C8AP07357 584 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 CNR1P21554 472 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 MST1P26927 711 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SGSHP51688 502 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SKP1P63208 163 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 OR8G1Q15617 311 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 TECRLQ5HYJ1 363 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 PYY3Q5JQD4 70 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SFRP5Q5T4F7 317 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 CXorf57Q6NSI4 855 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ARMC6Q6NXE6 501 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 MZT2AQ6P582 158 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 PSRC1Q6PGN9 363 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 LILRA6Q6PI73 481 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 Q6ZNB5 142 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 MOB3CQ70IA8 216 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 KREMEN2Q8NCW0 462 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 GPR26Q8NDV2 337 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 PYURFQ96I23 114 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 TGIF2Q9GZN2 237 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 EXOSC3Q9NQT5 275 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 VAPAQ9P0L0 249 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNF69Q9UC07 566 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 CHST2Q9Y4C5 530 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 GNG14A0A1W2PPG7 69 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 TRAPPC13A5PLN9 417 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 LDB2O43679 373 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 DPM1O60762 260 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 QDPRP09417 244 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 ABOP16442 354 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 BDKRB1P46663 353 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 PWP1Q13610 501 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 IHHQ14623 411 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 TSNQ15631 228 aaKnown RBP11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM35AQ53FP2 167 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNF660Q6AZW8 331 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 MRNIPQ6NTE8 343 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC29A4Q7RTT9 530 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC41A1Q8IVJ1 513 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 ZDHHC21Q8IVQ6 265 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 TWIST2Q8WVJ9 160 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 GATAD2BQ8WXI9 593 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 MAFIPQ8WZ33 124 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 WBP2Q969T9 261 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNF385AQ96PM9 386 aaKnown RBP11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC22A12Q96S37 553 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 MESP1Q9BRJ9 268 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 ADGRE3Q9BY15 652 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 CERS4Q9HA82 394 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 BCO1Q9HAY6 547 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 SIRT7Q9NRC8 400 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 TEX10Q9NXF1 929 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 RASL12Q9NYN1 266 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 PDP1Q9P0J1 537 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM184BQ9Y519 407 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 PTPRSQ13332 1948 aa11.87□□□□□ -0.51
RTFDC1-207ENST00000477573 RFXAPO00287 272 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 UBFD1O14562 309 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC28A2O43868 658 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TPST2O60704 377 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 FGF19O95750 216 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TFP02787 698 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 PRR35P0CG20 571 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 CR2P20023 1033 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 STK19P49842 368 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 SEC61A1P61619 476 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 CXADRP78310 365 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 ACVR1Q04771 509 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 MXD1Q05195 221 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 SKP2Q13309 424 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 ARHGEF7Q14155 803 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 CCDC85BQ15834 202 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM255AQ5JRV8 349 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 PLAG1Q6DJT9 500 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 GAREM2Q75VX8 874 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms