RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SOX7Q9BT81 388 aa8.65□□□□□ -1.02
COL4A5-204ENST00000477429 PRRG4Q9BZD6 226 aa8.65□□□□□ -1.02
COL4A5-204ENST00000477429 ESRP2Q9H6T0 727 aaKnown RBP8.65□□□□□ -1.02
COL4A5-204ENST00000477429 PFDN4Q9NQP4 134 aa8.65□□□□□ -1.02
COL4A5-204ENST00000477429 CISD1Q9NZ45 108 aaKnown RBP8.65□□□□□ -1.02
COL4A5-204ENST00000477429 TXNDC16Q9P2K2 825 aa8.65□□□□□ -1.02
COL4A5-204ENST00000477429 DMGDHQ9UI17 866 aaKnown RBP8.65□□□□□ -1.02
COL4A5-204ENST00000477429 PRSS50Q9UI38 385 aa8.65□□□□□ -1.02
COL4A5-204ENST00000477429 OR10H1Q9Y4A9 318 aa8.65□□□□□ -1.02
COL4A5-204ENST00000477429 ZNF780BQ9Y6R6 833 aa8.65□□□□□ -1.02
COL4A5-204ENST00000477429 ELOA3DA6NLF2 546 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-204ENST00000477429 SYCE1LA8MT33 242 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ESPNB1AK53 854 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 UPK1AO00322 258 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 OR4F21O95013 312 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 KLHL2O95198 593 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 IL33O95760 270 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ANGPTL1O95841 491 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 RPS17P08708 135 aaKnown RBP8.64□□□□□ -1.03
COL4A5-204ENST00000477429 FCGR2AP12318 317 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 KRT20P35900 424 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 CASP9P55211 416 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 RPS3AP61247 264 aaKnown RBP8.64□□□□□ -1.03
COL4A5-204ENST00000477429 GUCY2DQ02846 1103 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 IFT88Q13099 833 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 P2RY6Q15077 328 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ELOA3BQ3SY89 546 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 GLYR1Q49A26 553 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-204ENST00000477429 GGTA1PQ4G0N0 100 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 TMEM107Q6UX40 140 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ZDHHC24Q6UX98 284 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 TMEM151AQ8N4L1 468 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ELOA3Q8NG57 546 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF483Q8TF39 744 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-204ENST00000477429 C16orf78Q8WTQ4 265 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 SELENOMQ8WWX9 145 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 CDKL2Q92772 493 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 OSTF1Q92882 214 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 HS6ST2Q96MM7 605 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 RHNO1Q9BSD3 238 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 TACO1Q9BSH4 297 aaKnown RBP8.64□□□□□ -1.03
COL4A5-204ENST00000477429 CACNG6Q9BXT2 260 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 EBPLQ9BY08 206 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ACPTQ9BZG2 426 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 OR10A4Q9H209 315 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 ELOVL6Q9H5J4 265 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 L2HGDHQ9H9P8 463 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 SLC35C2Q9NQQ7 365 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 TMEM160Q9NX00 188 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 FAM120CQ9NX05 1096 aaKnown RBP8.64□□□□□ -1.03
COL4A5-204ENST00000477429 XPR1Q9UBH6 696 aa8.64□□□□□ -1.03
COL4A5-204ENST00000477429 DYSFO75923 2080 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 IGHV3-15A0A0B4J1V0 119 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 A0A1W2PRB8 838 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 MYO1GB0I1T2 1018 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 C9JVG2 144 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 LINC01387J3KSC0 135 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 MANBAO00462 879 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 PCDH7O60245 1069 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 BCAS2O75934 225 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 LYZL6O75951 148 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 ESRRBO95718 433 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 JUNP05412 331 aaKnown RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 TUBBP07437 444 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 NUDT6P53370 316 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 CDH11P55287 796 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 TRA2BP62995 288 aaKnown RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 PRR5P85299 388 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 CD226Q15762 336 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF239Q16600 458 aaKnown RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 FAM83EQ2M2I3 478 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 ERCC6LQ2NKX8 1250 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 PLPPR5Q32ZL2 321 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 CYP27C1Q4G0S4 372 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 FAM120AOSQ5T036 256 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 HBMQ6B0K9 141 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 GTPBP8Q8N3Z3 284 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 STEAP2Q8NFT2 490 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 RNF128Q8TEB7 428 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 C10orf105Q8TEF2 133 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF775Q96BV0 537 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 OTUB1Q96FW1 271 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 FAIM2Q9BWQ8 316 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 GRIP2Q9C0E4 1043 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 VPS11Q9H270 941 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 CXorf36Q9H7Y0 433 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 COQ10BQ9H8M1 238 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 CHODLQ9H9P2 273 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 MED17Q9NVC6 651 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 AHSPQ9NZD4 102 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 MCM8Q9UJA3 840 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 PSME2Q9UL46 239 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 ABCG2Q9UNQ0 655 aa8.63□□□□□ -1.03
COL4A5-204ENST00000477429 C19orf53Q9UNZ5 99 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 TNPO3Q9Y5L0 923 aaKnown RBP8.63□□□□□ -1.03
COL4A5-204ENST00000477429 A0A1W2PR80 420 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 ABCD4O14678 606 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 RAD51CO43502 376 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 LMX1BO60663 402 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 GUCY1B2O75343 617 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms