RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PAQR5Q9NXK6 330 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 A0A087WUU8 490 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CFIP05156 583 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 STAT5AP42229 794 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 DHPSP49366 369 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 EPHA5P54756 1037 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 PSMD4P55036 377 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ADAM15Q13444 863 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 DCST2Q5T1A1 773 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CDRT4Q8N9R6 151 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SYT14Q8NB59 555 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 HCAR2Q8TDS4 363 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ZDHHC1Q8WTX9 485 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ZG16BQ96DA0 208 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ALG8Q9BVK2 526 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 HDAC8Q9BY41 377 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 NUFIP1Q9UHK0 495 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ISPDA4D126 451 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 INMT-MINDY4F8WBC2 141 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SOCS6O14544 535 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CDC40O60508 579 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 WBP4O75554 376 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 EGFP01133 1207 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CPMP14384 443 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 BSGP35613 385 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 PSMB10P40306 273 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 LIM2P55344 173 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 MAZP56270 477 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SEC23BQ15437 767 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ZXDCQ2QGD7 858 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CNIH2Q6PI25 160 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CNRIP1Q96F85 164 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 FAM210AQ96ND0 272 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SERINC2Q96SA4 455 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ATP13A2Q9NQ11 1180 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 NANSQ9NR45 359 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 PPIL1Q9Y3C6 166 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 IER3IP1Q9Y5U9 82 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 LOC100509620A0A075B734 347 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 UGT2B7P16662 529 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CTHP32929 405 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ZFP36L2P47974 494 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 DPTQ07507 201 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ILKQ13418 452 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 GAS6Q14393 721 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SMAD2Q15796 467 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 OR5M10Q6IEU7 315 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 NCCRP1Q6ZVX7 275 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 PRICKLE2Q7Z3G6 844 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SIX5Q8N196 739 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF527Q8NB42 609 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CHPT1Q8WUD6 406 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 HS6ST2Q96MM7 605 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 GAS2L1Q99501 681 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 REPIN1Q9BWE0 567 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SEC61A2Q9H9S3 476 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 PDE7BQ9NP56 450 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 SLAMF7Q9NQ25 335 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 CNOT2Q9NZN8 540 aaKnown RBP10.32□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM5Q9Y2B1 443 aa10.32□□□□□ -0.76
COL27A1-204ENST00000477421 WDR81Q562E7 1941 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ASXL3Q9C0F0 2248 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 CASC3O15234 703 aaKnown RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 FLRT2O43155 660 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 GREM1O60565 184 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ARL6IP5O75915 188 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 CHRM4P08173 479 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 FBXO45P0C2W1 286 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 MAP2K3P46734 347 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ADPRHP54922 357 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 SNRPD2P62316 118 aaKnown RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 RPS25P62851 125 aaKnown RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 NFATC4Q14934 902 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 SLC48A1Q6P1K1 146 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 GID4Q8IVV7 300 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 SLC7A5P1Q8MH63 180 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 AVL9Q8NBF6 648 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 TNFAIP8L1Q8WVP5 186 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 NARS2Q96I59 477 aaKnown RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 SLC52A3Q9NQ40 469 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 GRHPRQ9UBQ7 328 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 PCDHGA4Q9Y5G9 962 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 KCNE3Q9Y6H6 103 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 GXYLT2A0PJZ3 443 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 UBE2QL1A1L167 161 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ZC3H12DA2A288 527 aaKnown RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 PIP5K1CO60331 668 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 RENP00797 406 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 GIMD1P0DJR0 217 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 DRD5P21918 477 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 RPS19P39019 145 aaKnown RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ADH7P40394 386 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 OR1D4P47884 311 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 KIR2DS3Q14952 304 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 NSDHLQ15738 373 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 CTF1Q16619 201 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 UBE2Q1Q7Z7E8 422 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 FAM160A2Q8N612 972 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms