RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 HMBOX1Q6NT76 420 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 BEND4Q6ZU67 534 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 GALNT10Q86SR1 603 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 GATSQ8NAP1 163 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 RAB3IL1Q8TBN0 382 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 UBLCP1Q8WVY7 318 aaPredicted RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 GTPBP3Q969Y2 492 aaKnown RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 SHCBP1LQ9BZQ2 653 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 TMEM185BQ9H7F4 350 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 EQTNQ9NQ60 294 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 C19orf53Q9UNZ5 99 aaPredicted RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 TIMM22Q9Y584 194 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 NUP214P35658 2090 aaPredicted RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 GXYLT2A0PJZ3 443 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 UPK1AO00322 258 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 TMCC2O75069 709 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 SLITRK5O94991 958 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 KCNH1O95259 989 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF17P17021 662 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 CDKN1AP38936 164 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 OCRLQ01968 901 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF844Q08AG5 666 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 SLC29A2Q14542 456 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 WDR75Q8IWA0 830 aaKnown RBP12.51□□□□□ -0.41
CCDC78-209ENST00000474647 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
CCDC78-209ENST00000474647 PIK3R3Q92569 461 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 FBXW5Q969U6 566 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
CCDC78-209ENST00000474647 TMEM204Q9BSN7 226 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 GLIPR2Q9H4G4 154 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 C3orf14Q9HBI5 128 aa12.51□□□□□ -0.41
CCDC78-209ENST00000474647 ARGLU1Q9NWB6 273 aaPredicted RBP12.51□□□□□ -0.41
CCDC78-209ENST00000474647 POLR3HQ9Y535 204 aaPredicted RBP12.51□□□□□ -0.41
CCDC78-209ENST00000474647 NDUFB5O43674 189 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 SOX30O94993 753 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 PSMG1O95456 288 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 ENO1P06733 434 aaKnown RBP12.5□□□□□ -0.41
CCDC78-209ENST00000474647 NUDT17P0C025 328 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 H2AFXP16104 143 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-209ENST00000474647 ME2P23368 584 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 AGTR1P30556 359 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 GABRA3P34903 492 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 GSTM5P46439 218 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF41P51814 821 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-209ENST00000474647 PRR5P85299 388 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 HSPB3Q12988 150 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 TSC22D1Q15714 1073 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 IMPG1Q17R60 797 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC78-209ENST00000474647 TMEM44Q2T9K0 475 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 BEND6Q5SZJ8 279 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-209ENST00000474647 HEPHL1Q6MZM0 1159 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 GALNT18Q6P9A2 607 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 APOOLQ6UXV4 268 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 SZRD1Q7Z422 152 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF619Q8N2I2 560 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 OR2L13Q8N349 312 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 TMEM151AQ8N4L1 468 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 GPR151Q8TDV0 419 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 DCAKDQ8WVC6 231 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 S100PBPQ96BU1 408 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 RNF145Q96MT1 663 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 NPAS1Q99742 590 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 LMF2Q9BU23 707 aaKnown RBP12.5□□□□□ -0.41
CCDC78-209ENST00000474647 REG4Q9BYZ8 158 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 YAE1D1Q9NRH1 226 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 PAQR5Q9NXK6 330 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-209ENST00000474647 TMEM216Q9P0N5 145 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 GRID1Q9ULK0 1009 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 STK38LQ9Y2H1 464 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 GPR52Q9Y2T5 361 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 RNF115Q9Y4L5 304 aa12.5□□□□□ -0.41
CCDC78-209ENST00000474647 IGLV3-32A0A0A0MS00 114 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 DLX3O60479 287 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 CD3EP07766 207 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 GPC1P35052 558 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 ACVR1BP36896 505 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 FAPQ12884 760 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 LCP2Q13094 533 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 ETFDHQ16134 617 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 HBMQ6B0K9 141 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 ESPNLQ6ZVH7 1005 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 EXOC3L1Q86VI1 746 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 OR2V1Q8NHB1 315 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 NEUROG1Q92886 237 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 ELP4Q96EB1 424 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 SH3YL1Q96HL8 342 aaPredicted RBP12.49□□□□□ -0.41
CCDC78-209ENST00000474647 ADGRG7Q96K78 797 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 AMDHD1Q96NU7 426 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 GLRX2Q9NS18 164 aa12.49□□□□□ -0.41
CCDC78-209ENST00000474647 MAGED1Q9Y5V3 778 aaPredicted RBP12.49□□□□□ -0.41
CCDC78-209ENST00000474647 A0A087WZY1 265 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 A0A0J9YW62 118 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 EXOC1LA0A1B0GW35 172 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 A0A1W2PP18 115 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 A0A1W2PRB8 838 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 NTN1O95631 604 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms