RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 RNF44Q7L0R7 432 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 DPPA4Q7L190 304 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 TRIM74Q86UV6 250 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 SATL1Q86VE3 508 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 EPHX4Q8IUS5 362 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 CHERPQ8IWX8 916 aaKnown RBP4.84□□□□□ -1.63
FN1-219ENST00000474036 MSRB3Q8IXL7 192 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 TCAIMQ8N3R3 496 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 DPP10Q8N608 796 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 TRAM1L1Q8N609 369 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 METTL25Q8N6Q8 603 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 LMNTD1Q8N9Z9 388 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 TRPV3Q8NET8 790 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 OR6C4Q8NGE1 309 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 FBXO30Q8TB52 745 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 MCOLN3Q8TDD5 553 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 CYGBQ8WWM9 190 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 SLC13A3Q8WWT9 602 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 FIG4Q92562 907 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 NCLNQ969V3 563 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 PDXPQ96GD0 296 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 PPP1R16AQ96I34 528 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 VPS50Q96JG6 964 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 ZNF597Q96LX8 424 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 NSMCE2Q96MF7 247 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 TSSK3Q96PN8 268 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 C19orf43Q9BQ61 176 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 H2AFJQ9BTM1 129 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 TBCDQ9BTW9 1192 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 THUMPD3Q9BV44 507 aaKnown RBP4.84□□□□□ -1.63
FN1-219ENST00000474036 NTMT1Q9BV86 223 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 OSBPL11Q9BXB4 747 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 EBPLQ9BY08 206 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 MRPS26Q9BYN8 205 aaKnown RBP4.84□□□□□ -1.63
FN1-219ENST00000474036 ACPTQ9BZG2 426 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 ULBP3Q9BZM4 244 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 FAM192AQ9GZU8 254 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 MUC13Q9H3R2 512 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 ELOVL6Q9H5J4 265 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 PARVBQ9HBI1 364 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 ARMC1Q9NVT9 282 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 C1orf109Q9NX04 203 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 SH3BGRL2Q9UJC5 107 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 DLGAP4Q9Y2H0 992 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 OR1A2Q9Y585 309 aa4.84□□□□□ -1.63
FN1-219ENST00000474036 RNF103-CHMP3A0A140T963 221 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 CXorf51AA0A1B0GTR3 108 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 A0A1W2PQ67 120 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 DYTNA2CJ06 578 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 CCDC160A6NGH7 325 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 AQP7P3A6NL99 342 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 H0YJX3 145 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 EIF3FO00303 357 aaPredicted RBP4.83□□□□□ -1.64
FN1-219ENST00000474036 EI24O14681 340 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 SLC16A5O15375 505 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 B4GAT1O43505 415 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 KIF1CO43896 1103 aaKnown RBP4.83□□□□□ -1.64
FN1-219ENST00000474036 GMNNO75496 209 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 INMTO95050 263 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 TNFAIP8O95379 198 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 PCCBP05166 539 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 PCNAP12004 261 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 FCGR1AP12314 374 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 CDH1P12830 882 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 ZNF30P17039 623 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 S100A3P33764 101 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 MMP12P39900 470 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 SLC6A12P48065 614 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 CDH15P55291 814 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 DCDC1P59894 354 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 PFN3P60673 137 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 SRP54P61011 504 aaKnown RBP4.83□□□□□ -1.64
FN1-219ENST00000474036 HOXA4Q00056 320 aaPredicted RBP4.83□□□□□ -1.64
FN1-219ENST00000474036 IRF8Q02556 426 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 LTBQ06643 244 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 CHIT1Q13231 466 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 NAE1Q13564 534 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 FHL3Q13643 280 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 KIAA0040Q15053 153 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 MAPKAPK3Q16644 382 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 CCSMST1Q4G0I0 132 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 XKR6Q5GH73 641 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.83□□□□□ -1.64
FN1-219ENST00000474036 CDKL4Q5MAI5 379 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 HENMT1Q5T8I9 393 aaKnown RBP4.83□□□□□ -1.64
FN1-219ENST00000474036 IRAK1BP1Q5VVH5 260 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 ZNF626Q68DY1 528 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 KRT80Q6KB66 452 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 TMEM220Q6QAJ8 160 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 KIRREL2Q6UWL6 708 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 ENPP6Q6UWR7 440 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 ZNF66Q6ZN08 573 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 THOC6Q86W42 341 aaKnown RBP4.83□□□□□ -1.64
FN1-219ENST00000474036 ANKRD46Q86W74 232 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 CARM1Q86X55 608 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 TBC1D21Q8IYX1 336 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 ESX1Q8N693 406 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 SIRT6Q8N6T7 355 aa4.83□□□□□ -1.64
FN1-219ENST00000474036 RBMXL3Q8N7X1 1067 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms