RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NDUFA13Q9P0J0 144 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 CBLCQ9ULV8 474 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 OR10H1Q9Y4A9 318 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 TCRBV16S1A1N1A0A5B0 115 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 MAN1A2O60476 641 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 MAP2K4P45985 399 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 ANGPT1Q15389 498 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 ZBED5Q49AG3 693 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 RHBDD2Q6NTF9 364 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 MED25Q71SY5 747 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 ZNF540Q8NDQ6 660 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 ZNF721Q8TF20 911 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 EFHD2Q96C19 240 aaPredicted RBP16.64■□□□□ 0.25
VARS2-206ENST00000473916 CTRCQ99895 268 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 PELOQ9BRX2 385 aaKnown RBP16.64■□□□□ 0.25
VARS2-206ENST00000473916 PLA2G12AQ9BZM1 189 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 SLC7A5P2Q9GIP4 190 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 ARRDC1-AS1Q9H2J1 176 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 DUSP21Q9H596 190 aa16.64■□□□□ 0.25
VARS2-206ENST00000473916 SIDT1Q9NXL6 827 aaKnown RBP16.64■□□□□ 0.25
VARS2-206ENST00000473916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.63■□□□□ 0.25
VARS2-206ENST00000473916 PCMT1P22061 227 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 GSTT1P30711 240 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 GALNSP34059 522 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 ACY1Q03154 408 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 MVKQ03426 396 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 ILKQ13418 452 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 BORAQ6PGQ7 559 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 AHSA2Q719I0 299 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 CLVS1Q8IUQ0 354 aaPredicted RBP16.63■□□□□ 0.25
VARS2-206ENST00000473916 OR4C3Q8NH37 302 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 ZNF578Q96N58 590 aaPredicted RBP16.63■□□□□ 0.25
VARS2-206ENST00000473916 NRSN2Q9GZP1 204 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 NAA50Q9GZZ1 169 aaKnown RBP16.63■□□□□ 0.25
VARS2-206ENST00000473916 LHPPQ9H008 270 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 EGLN3Q9H6Z9 239 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 LIN28AQ9H9Z2 209 aaKnown RBP16.63■□□□□ 0.25
VARS2-206ENST00000473916 POLE3Q9NRF9 147 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 IMPAD1Q9NX62 359 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 CLCA3PQ9Y6N3 262 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 RALGAPA1Q6GYQ0 2036 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 SCRG1O75711 98 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 OR5F1O95221 314 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 LYPD3O95274 346 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 MT-ND2P03891 347 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 IGKV3-11P04433 115 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 MPLP40238 635 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 GPR4P46093 362 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 OMPP47874 163 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 MASP1P48740 699 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 CXCR4P61073 352 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 OR1Q1Q15612 314 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 AP1ARQ63HQ0 302 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 DESI1Q6ICB0 168 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 RANBP3LQ86VV4 465 aaPredicted RBP16.63■□□□□ 0.25
VARS2-206ENST00000473916 SLITRK4Q8IW52 837 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 NRMQ8IXM6 262 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 IL4I1Q96RQ9 567 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 PRSS27Q9BQR3 290 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 NUDT9Q9BW91 350 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 NXF5Q9H1B4 397 aaKnown RBP16.63■□□□□ 0.25
VARS2-206ENST00000473916 SELENONQ9NZV5 590 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 PCDHGA10Q9Y5H3 936 aa16.63■□□□□ 0.25
VARS2-206ENST00000473916 IGHV3-20A0A0C4DH32 117 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 NPIPB9F8W1W9 429 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 YOD1Q5VVQ6 348 aaPredicted RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 LCN10Q6JVE6 187 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 P3H2Q8IVL5 708 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 GFM1Q96RP9 751 aaKnown RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 MKKSQ9NPJ1 570 aaPredicted RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 DNAJB12Q9NXW2 375 aaKnown RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 SRPK3Q9UPE1 567 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 INMTO95050 263 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 DRD5P21918 477 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 PCSK6P29122 969 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 SLC5A2P31639 672 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 CDC42P60953 191 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 EMX1Q04741 257 aaPredicted RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 ELAVL1Q15717 326 aaKnown RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 GTF2IRD2BQ6EKJ0 949 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 BCDIN3DQ7Z5W3 292 aaKnown RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 RABEPKQ7Z6M1 372 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 GTF2IRD2Q86UP8 949 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 PRR22Q8IZ63 422 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 OR7G1Q8NGA0 311 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 OR8D4Q8NGM9 314 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 RNF217Q8TC41 542 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 STT3BQ8TCJ2 826 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 ACOT11Q8WXI4 607 aaPredicted RBP16.62■□□□□ 0.25
VARS2-206ENST00000473916 GAL3ST4Q96RP7 486 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 TSC22D3Q99576 134 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 SCN3BQ9NY72 215 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 PRODH2Q9UF12 536 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 ENOPH1Q9UHY7 261 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 RARRES3Q9UL19 164 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 TPRKBQ9Y3C4 175 aa16.62■□□□□ 0.25
VARS2-206ENST00000473916 CDC14CA4D256 554 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 D6RAR5 112 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 SYPP08247 313 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 JUNBP17275 347 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms