RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PYY3Q5JQD4 70 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TSTD2Q5T7W7 516 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 DEGS2Q6QHC5 323 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ENPP6Q6UWR7 440 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 LRRN1Q6UXK5 716 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GAREM2Q75VX8 874 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC29A4Q7RTT9 530 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ADGRA1Q86SQ6 560 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ATG4DQ86TL0 474 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PQLC3Q8N755 202 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF321PQ8N8H1 164 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OR4Q3Q8NH05 313 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ARNTL2Q8WYA1 636 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GCDHQ92947 438 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 C3orf49Q96BT1 292 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 L3HYPDHQ96EM0 354 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MOCOSQ96EN8 888 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 RNF157Q96PX1 679 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 DDOQ99489 341 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM47Q9BQJ4 181 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 HAPLN2Q9GZV7 340 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 XYLT2Q9H1B5 865 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 WDR26Q9H7D7 661 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 METTL17Q9H7H0 456 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NRBP2Q9NSY0 501 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NLGN3Q9NZ94 848 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 EXO1Q9UQ84 846 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 FIS1Q9Y3D6 152 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF236Q9UL36 1845 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 C2orf92A0A1B0GVN3 265 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 LRIT2A6NDA9 550 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM200CA6NKL6 621 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ADAM10O14672 748 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 LDLRAD4O15165 306 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC19A2O60779 497 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TUSC2O75896 110 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CDRT1O95170 752 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SIX3O95343 332 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 METTL18O95568 372 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 C1RP00736 705 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MT-ND4LP03901 98 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CD2P06729 351 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MYOGP15173 224 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ABOP16442 354 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF14P17017 642 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CNR1P21554 472 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 HTR2AP28223 471 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PPP2R1BP30154 601 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 HOXA9P31269 272 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 VIPR1P32241 457 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CRYBB2P43320 205 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PPT1P50897 306 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CXADRP78310 365 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 LMAN2Q12907 356 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NPRL3Q12980 569 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SKP2Q13309 424 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NAE1Q13564 534 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 IL18Q14116 193 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MED22Q15528 200 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MPPED2Q15777 294 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MEDAGQ5VYS4 303 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC25A24Q6NUK1 477 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CDC73Q6P1J9 531 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZCCHC12Q6PEW1 402 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 LCLAT1Q6UWP7 414 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF730Q6ZMV8 503 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MOB3CQ70IA8 216 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TMUB2Q71RG4 321 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF605Q86T29 641 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 LRRC18Q8N456 261 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SPICQ8N5J4 248 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SYT14Q8NB59 555 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CPEB3Q8NE35 698 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GPRC5AQ8NFJ5 357 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OR9A1PQ8NGU1 263 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 C22orf15Q8WYQ4 148 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MARS2Q96GW9 593 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NOL4LQ96MY1 436 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GINS4Q9BRT9 223 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NDUFAF3Q9BU61 184 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NLNQ9BYT8 704 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF552Q9H707 407 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 BARX1Q9HBU1 254 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 FBRSL1Q9HCM7 1045 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 HHATLQ9HCP6 504 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PARPBPQ9NWS1 579 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 NDUFB11Q9NX14 153 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GRHPRQ9UBQ7 328 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF629Q9UEG4 869 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 IKZF3Q9UKT9 509 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GABRQQ9UN88 632 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TNFSF13BQ9Y275 285 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 COL11A1P12107 1806 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A1W2PPQ1 181 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM86B1E9PN63 330 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 H3BML4 177 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 RFXAPO00287 272 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 LRRTM2O43300 516 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 MBTPS2O43462 519 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC28A2O43868 658 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms