RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.32□□□□□ -1.08
SMC4-214ENST00000472991 ARL2BPQ9Y2Y0 163 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 PCDHGB3Q9Y5G1 929 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 ZNF462Q96JM2 2506 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 LOC100653049A0A140TA62 436 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 DUXAA6NLW8 204 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 BBIP1A8MTZ0 92 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 NPIPA7E9PJI5 369 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 CLIC1O00299 241 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 HMGN4O00479 90 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 MRASO14807 208 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ASNA1O43681 348 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 SLC28A2O43868 658 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 KRT34O76011 436 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 UNC5CO95185 931 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 WISP1O95388 367 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 UTS2O95399 124 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 AGR2O95994 175 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 AK1P00568 194 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 COX4I1P13073 169 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ETFAP13804 333 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ZNF24P17028 368 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ATP6V1C1P21283 382 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 EVI2BP34910 448 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 PTGDSP41222 190 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 CRATP43155 626 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 MASP1P48740 699 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 PLGLB1Q02325 96 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 CYLC2Q14093 348 aaPredicted RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 TRMT5Q32P41 509 aaKnown RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 GRAMD1BQ3KR37 738 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 MMEL1Q495T6 779 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ATAD3BQ5T9A4 648 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 GKAP1Q5VSY0 366 aaPredicted RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 TMEM81Q6P7N7 255 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 DLEU7Q6UYE1 221 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 C16orf62Q7Z3J2 963 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ZFP62Q8NB50 900 aaPredicted RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 POGLUT1Q8NBL1 392 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 CHDHQ8NE62 594 aaPredicted RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 OR52N2Q8NGI0 321 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 CPT1CQ8TCG5 803 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 RNF138Q8WVD3 245 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 RCN3Q96D15 328 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ZNF597Q96LX8 424 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 JSRP1Q96MG2 331 aaPredicted RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 SDF2Q99470 211 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 CGREF1Q99674 301 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 G6PC3Q9BUM1 346 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 ANGPTL4Q9BY76 406 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 TTTY12Q9BZ98 90 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 TRIM8Q9BZR9 551 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 RAD21L1Q9H4I0 556 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 IKZF5Q9H5V7 419 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
SMC4-214ENST00000472991 BOKQ9UMX3 212 aaPredicted RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.31□□□□□ -1.08
SMC4-214ENST00000472991 PRAMEF27A3QJZ7 478 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 ANKRD33BA6NCL7 494 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 LRRC3CA6NJW4 275 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 C17orf51A8MQB3 221 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 FAM166BA8MTA8 275 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 ACOT7O00154 380 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 FXYD1O00168 92 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 TFECO14948 347 aaPredicted RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 FADS1O60427 444 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 TRIM3O75382 744 aaPredicted RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 DCTN3O75935 186 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 SOX30O94993 753 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 OXSR1O95747 527 aaPredicted RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 CRYABP02511 175 aaKnown RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 FSTP19883 344 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 PPIBP23284 216 aaKnown RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 LCN1P31025 176 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 DCTP40126 519 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 MTPNP58546 118 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 DSTNP60981 165 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 TXNL4AP83876 142 aaKnown RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 HPCAP84074 193 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 ALDH6A1Q02252 535 aaKnown RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 TLE1Q04724 770 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 C19orf57Q0VDD7 668 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 FOXO1Q12778 655 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 FADDQ13158 208 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 SELPLGQ14242 412 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 CAPRIN1Q14444 709 aaKnown RBP8.3□□□□□ -1.08
SMC4-214ENST00000472991 RGNQ15493 299 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 SYPL1Q16563 259 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 ARHGAP11BQ3KRB8 267 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 GPAT3Q53EU6 434 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 RUNDC3AQ59EK9 446 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 COQ5Q5HYK3 327 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 SLC30A6Q6NXT4 461 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 C10orf111Q8N326 155 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 ANKFN1Q8N957 763 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 CCDC197Q8NCU1 140 aa8.3□□□□□ -1.08
SMC4-214ENST00000472991 DNAJB8Q8NHS0 232 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms