RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 USP36Q9P275 1121 aaKnown RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 ZNF282Q9UDV7 671 aaPredicted RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 TESQ9UGI8 421 aaKnown RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 PURGQ9UJV8 347 aaKnown RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 ING1Q9UK53 422 aaPredicted RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 EXO1Q9UQ84 846 aaKnown RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 HNRNPCL2B2RXH8 293 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 H7C2Y5 167 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 PDCD5O14737 125 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 GCM2O75603 506 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 HLA-DPB1P04440 258 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 NMBP08949 121 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 COX7A2P14406 83 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CXCL3P19876 107 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 DGKAP23743 735 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 MC4RP32245 332 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CSNK1EP49674 416 aaKnown RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 MEOX2P50222 304 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CTBP2P56545 445 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 YBEYP58557 167 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 FABP5Q01469 135 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CRYZQ08257 329 aaKnown RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 C2orf80Q0P641 193 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 SP140Q13342 867 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ZNF235Q14590 738 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 UGT8Q16880 541 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 GSG1Q2KHT4 349 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CRB2Q5IJ48 1285 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 HECTD3Q5T447 861 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ZNF770Q6IQ21 691 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 NOXRED1Q6NXP6 359 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 PCSK4Q6UW60 755 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 DHRS13Q6UX07 377 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 IKBIPQ70UQ0 350 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ZNF683Q8IZ20 524 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 PCNPQ8WW12 178 aaKnown RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 ST8SIA2Q92186 375 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 FBXO32Q969P5 355 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 SENP5Q96HI0 755 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 LCORQ96JN0 433 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 SLC6A18Q96N87 628 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 OR4K3Q96R72 315 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 SPATA5L1Q9BVQ7 753 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 POLDIP3Q9BY77 421 aaKnown RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 BIN3Q9NQY0 253 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ENAMQ9NRM1 1142 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 NUDT15Q9NV35 164 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ACTR10Q9NZ32 417 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 REV1Q9UBZ9 1251 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 C1orf226A1L170 272 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 NEDD8-MDP1E9PL57 170 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 L7N2F9 121 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 FLRT2O43155 660 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 TNFSF14O43557 240 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 STK16O75716 305 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CER1O95813 267 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 TBX18O95935 607 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 IFNA4P05014 189 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 TACR1P25103 407 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 POU1F1P28069 291 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ACSL1P33121 698 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ETV5P41161 510 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 HAAOP46952 286 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 PITPNBP48739 271 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 RAB13P51153 203 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 TSPAN5P62079 268 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 FGL1Q08830 312 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ACSM1Q08AH1 577 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 RAB40BQ12829 278 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 SERINC3Q13530 473 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CYP27C1Q4G0S4 372 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 PDSS1Q5T2R2 415 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 GCNT6Q5T4J0 391 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 RAET1GQ6H3X3 334 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CERS6Q6ZMG9 384 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ZNF704Q6ZNC4 412 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 TPGS1Q6ZTW0 290 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 SHFQ7M4L6 423 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 NLRC3Q7RTR2 1065 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CAMKMTQ7Z624 323 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 CADM4Q8NFZ8 388 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 OR4D10Q8NGI6 311 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 OR2T35Q8NGX2 323 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 OR56B4Q8NH76 319 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 TMEM203Q969S6 136 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 MS4A7Q9GZW8 240 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 ABCG4Q9H172 646 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 OSGEPL1Q9H4B0 414 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 TMEM38AQ9H6F2 299 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 SARS2Q9NP81 518 aaKnown RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 LATS2Q9NRM7 1088 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 ZNF624Q9P2J8 865 aaPredicted RBP9.45□□□□□ -0.9
APTX-216ENST00000472896 EPHA6Q9UF33 1036 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 KCND3Q9UK17 655 aa9.45□□□□□ -0.9
APTX-216ENST00000472896 PPIEQ9UNP9 301 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms