RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 A0A0G2JLW4 131 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 LOC390937A0A1W2PQ73 354 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 HEATR9A2RTY3 570 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ZNF724A8MTY0 619 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 HHLA1C9JL84 531 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 POLR2DO15514 142 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 RNF113AO15541 343 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 ZNF749O43361 778 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 NMT2O60551 498 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 KHDRBS3O75525 346 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 OR2J3O76001 311 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ACAA1P09110 424 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 RALBP11234 206 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 PSG1P11464 419 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 FGF3P11487 239 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 STIP1P31948 543 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 EPHX2P34913 555 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 AVPR1BP47901 424 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CSNK2BP67870 215 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 DLG1Q12959 904 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 MICBQ29980 383 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ZNF829Q3KNS6 432 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 SLC35D3Q5M8T2 416 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 METTL11BQ5VVY1 283 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 DEGS2Q6QHC5 323 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 LINGO4Q6UY18 593 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SCARA5Q6ZMJ2 495 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 DPY19L2P2Q6ZN68 376 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 COLCA1Q6ZS62 124 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 KCTD8Q6ZWB6 473 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ZNF554Q86TJ5 538 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CCDC71Q8IV32 467 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 NAGSQ8N159 534 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ASCC1Q8N9N2 400 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 RNF149Q8NC42 400 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ZNRF1Q8ND25 227 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 OR4K14Q8NGD5 310 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 OR2T11Q8NH01 316 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 TRMT10AQ8TBZ6 339 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 DNAJA4Q8WW22 397 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 ISG20Q96AZ6 181 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 SGK494Q96LW2 274 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CDCA3Q99618 268 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 CHRNA10Q9GZZ6 450 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 RBM38Q9H0Z9 239 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 LIME1Q9H400 295 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 PLEKHA3Q9HB20 300 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 STARD5Q9NSY2 213 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ZDHHC18Q9NUE0 388 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ZNF224Q9NZL3 707 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 HACD3Q9P035 362 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SPATA7Q9P0W8 599 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 GGA2Q9UJY4 613 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SLC7A7Q9UM01 511 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 MRPS7Q9Y2R9 242 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 TIMM10BQ9Y5J6 103 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 A0A1W2PP64 1363 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 NPIPA5A0A0B4J1W7 369 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 KIR2DL5BA0A0G2JN68 375 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 KIR2DL5BA0A0G2JPC4 375 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 RPS10-NUDT3A0A1W2PQS6 291 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 HNRNPCL2B2RXH8 293 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 NPIPA5E9PKD4 350 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 RGS16O15492 202 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 CIDEAO60543 219 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 DUSP11O75319 330 aaKnown RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 DIRAS1O95057 198 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 FGFR1OPO95684 399 aaKnown RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 PIGRP01833 764 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 BMI1P35226 326 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 SLC1A2P43004 574 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 RFX2P48378 723 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 AMTP48728 403 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 IRX3P78415 501 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 GABPAQ06546 454 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 HSPA14Q0VDF9 509 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 CHRNA6Q15825 494 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 FAM189A2Q15884 450 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 ETFDHQ16134 617 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 WDR38Q5JTN6 314 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 SPANXN2Q5MJ10 180 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 RAET1LQ5VY80 246 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 SLC8B1Q6J4K2 584 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 ZNF852Q6ZMS4 543 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 Q6ZSR3 168 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 CDHR3Q6ZTQ4 885 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 NANOGNBQ7Z5D8 188 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 TSEN54Q7Z6J9 526 aaKnown RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 KIR2DL5AQ8N109 375 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 NANOGP1Q8N7R0 232 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 PRSS33Q8NF86 280 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 OR1L3Q8NH93 324 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 KIR2DL5BQ8NHK3 375 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 GOLGA5Q8TBA6 731 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 MIPOL1Q8TD10 442 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 UPRTQ96BW1 309 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 CNRIP1Q96F85 164 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 COQ2Q96H96 371 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 TGM7Q96PF1 710 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 SLC39A3Q9BRY0 314 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms