RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SSTP61278 116 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 RPL8P62917 257 aaKnown RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 HERVK_113P63132 956 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ERVK-8P63133 956 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 VLDLRP98155 873 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF154Q13106 437 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 UNC119Q13432 240 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 EIF4EBP1Q13541 118 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 TSTA3Q13630 321 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 KARSQ15046 597 aaKnown RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PKN2Q16513 984 aaKnown RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SYPL1Q16563 259 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ZSWIM7Q19AV6 140 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SMU1Q2TAY7 513 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 LRIT3Q3SXY7 679 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 AGKQ53H12 422 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PVRIGQ6DKI7 326 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SLC39A4Q6P5W5 647 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 STAC2Q6ZMT1 411 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ZFP2Q6ZN57 461 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 TOM1L2Q6ZVM7 507 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PAQR9Q6ZVX9 377 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 GOLGA7Q7Z5G4 137 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 NET1Q7Z628 596 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 CCDC170Q8IYT3 715 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 FAM71E2Q8N5Q1 922 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM252Q8N6L7 170 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 LRRC17Q8N6Y2 441 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 NKAIN3Q8N8D7 197 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 Q8N9W7 124 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 OR2T33Q8NG76 320 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 OR9A4Q8NGU2 314 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PSMA8Q8TAA3 256 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ART4Q93070 314 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PTP4A1Q93096 173 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ADIPOR1Q96A54 375 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 NDUFAF3Q9BU61 184 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ERVK-6Q9BXR3 956 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SLC17A9Q9BYT1 436 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 NMNAT2Q9BZQ4 307 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SIRPDQ9H106 197 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 C2orf40Q9H1Z8 148 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ZDHHC11Q9H8X9 412 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 CAB39LQ9H9S4 337 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PRMT8Q9NR22 394 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 NECAP2Q9NVZ3 263 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 GALPQ9UBC7 116 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 GHRLQ9UBU3 117 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF282Q9UDV7 671 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 FAM153AQ9UHL3 310 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF490Q9ULM2 529 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 UBQLN1Q9UMX0 589 aaKnown RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SAMD4AQ9UPU9 718 aaKnown RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 USP16Q9Y5T5 823 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 CACNG2Q9Y698 323 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SLCO1B1Q9Y6L6 691 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ASTN1O14525 1302 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 GAKO14976 1311 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PKD1L2Q7Z442 2459 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 IGLV4-60A0A075B6I1 120 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 A0A1W2PRQ8 180 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 TTC26A0AVF1 554 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 FAM166BA8MTA8 275 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 A8MUA0 341 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 H0YL77 283 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 K7N7A8 449 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 DLGAP1O14490 977 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 ADAM12O43184 909 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF264O43296 627 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 EFNA2O43921 213 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 FMO6PO60774 539 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 HSF2BPO75031 334 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 ICOSLGO75144 302 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 GOSR1O95249 250 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 KLF8O95600 359 aaPredicted RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 MMP1P03956 469 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 ABHD2P08910 425 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 THRBP10828 461 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF823P16415 610 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 RCC1P18754 421 aaPredicted RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 MAGP20916 626 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 MUTP22033 750 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 AQP1P29972 269 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 CTNNA1P35221 906 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 CASP3P42574 277 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 BTDP43251 543 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 KIR2DS2P43631 304 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 HTR5AP47898 357 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 SLC6A8P48029 635 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 HNRNPFP52597 415 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 APOC4P55056 127 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 SRP54P61011 504 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 MRPS11P82912 194 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 MRPS6P82932 125 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 CARTPTQ16568 116 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 DNAJC21Q5F1R6 531 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 FAM120AOSQ5T036 256 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 BTNL3Q6UXE8 466 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms