RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NIPAL3Q6P499 406 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 SMARCD3Q6STE5 483 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 CXXC5Q7LFL8 322 aaKnown RBP12.71□□□□□ -0.37
BRCA1-209ENST00000470026 C11orf74Q86VG3 221 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 NR2C2APQ86WQ0 139 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 ACBD7Q8N6N7 88 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 KCT2Q8NC54 265 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 KRCC1Q9NPI7 259 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-209ENST00000470026 ACOXLQ9NUZ1 547 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 OR6C2Q9NZP2 312 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 SLC7A7Q9UM01 511 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 WDR45Q9Y484 360 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 HEBP2Q9Y5Z4 205 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 MAU2Q9Y6X3 613 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 CD8B2A6NJW9 211 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 RGS9O75916 674 aaPredicted RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 CD8BP10966 210 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 ERP29P30040 261 aaKnown RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 RPS15AP62244 130 aaKnown RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 SNRPNP63162 240 aaKnown RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 RPS21P63220 83 aaKnown RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 RUNX3Q13761 415 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 IL18Q14116 193 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 TJAP1Q5JTD0 557 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 MEPCEQ7L2J0 689 aaKnown RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 ABI3BPQ7Z7G0 1075 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 CACUL1Q86Y37 369 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 KLBQ86Z14 1044 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 TRIM48Q8IWZ4 208 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 KISS1RQ969F8 398 aaPredicted RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 UPRTQ96BW1 309 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 TM4SF19Q96DZ7 209 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 AHCYL2Q96HN2 611 aaKnown RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 SDF2Q99470 211 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 ZNF350Q9GZX5 532 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 OR52D1Q9H346 318 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 NIPAL2Q9H841 368 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 BABAM2Q9NXR7 383 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 H2AFY2Q9P0M6 372 aaPredicted RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 PHF11Q9UIL8 331 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 ALG5Q9Y673 324 aa12.71□□□□□ -0.38
BRCA1-209ENST00000470026 SIRT4Q9Y6E7 314 aaPredicted RBP12.71□□□□□ -0.38
BRCA1-209ENST00000470026 C2orf92A0A1B0GVN3 265 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 ISM1B1AKI9 464 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 RFXAPO00287 272 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 TBXA2RP21731 343 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 SHC2P98077 582 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 EFR3AQ14156 821 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 DUSP5Q16690 384 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 FHL5Q5TD97 284 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 VITQ6UXI7 678 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 USP53Q70EK8 1073 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 MTSS1LQ765P7 747 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 UBE2J2Q8N2K1 259 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 LNX2Q8N448 690 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 PHOSPHO2Q8TCD6 241 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
BRCA1-209ENST00000470026 GON7Q9BXV9 100 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 KCNN2Q9H2S1 579 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 ISG20L2Q9H9L3 353 aaKnown RBP12.7□□□□□ -0.38
BRCA1-209ENST00000470026 INPP5EQ9NRR6 644 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 CYSLTR2Q9NS75 346 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 PTGFRNQ9P2B2 879 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 TRAPPC13A5PLN9 417 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 FAM25AB3EWG3 89 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 FAM25CB3EWG5 89 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 FAM25GB3EWG6 89 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 DVL2O14641 736 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 ZNF888P0CJ79 500 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-209ENST00000470026 HTR2AP28223 471 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 GZMKP49863 264 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 CD83Q01151 205 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 ADAM15Q13444 863 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 TNK1Q13470 666 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 HBMQ6B0K9 141 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 THOC7Q6I9Y2 204 aaKnown RBP12.7□□□□□ -0.38
BRCA1-209ENST00000470026 TANGO2Q6ICL3 276 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 WDR88Q6ZMY6 472 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 ADGRD2Q7Z7M1 963 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 ASPGQ86U10 573 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 GLCCI1Q86VQ1 547 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 AMIGO1Q86WK6 493 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 YIPF7Q8N8F6 280 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 OR51G2Q8NGK0 314 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 FLVCR1-AS1Q8TAF5 88 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 UBASH3BQ8TF42 649 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 OTULINQ96BN8 352 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 APOOQ9BUR5 198 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 PIGUQ9H490 435 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 SIDT1Q9NXL6 827 aaKnown RBP12.7□□□□□ -0.38
BRCA1-209ENST00000470026 GDE1Q9NZC3 331 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 MALT1Q9UDY8 824 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 GPSM3Q9Y4H4 160 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 COLEC10Q9Y6Z7 277 aa12.7□□□□□ -0.38
BRCA1-209ENST00000470026 FAM240BA0A1B0GVZ2 78 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms