RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 OR1N1Q8NGS0 311 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 CNOT9Q92600 299 aaKnown RBP16.75■□□□□ 0.27
SMC4-211ENST00000469858 PMEPA1Q969W9 287 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 ADIPOR1Q96A54 375 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 LCORQ96JN0 433 aaPredicted RBP16.75■□□□□ 0.27
SMC4-211ENST00000469858 MESP1Q9BRJ9 268 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 NRSN2Q9GZP1 204 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 AKIRIN1Q9H9L7 192 aaPredicted RBP16.75■□□□□ 0.27
SMC4-211ENST00000469858 HSPE1-MOB4S4R3N1 261 aa16.75■□□□□ 0.27
SMC4-211ENST00000469858 SYNDIG1LA6NDD5 238 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 TRIM64A6NGJ6 449 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 FRG2CA6NGY1 282 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 NPIPB9F8W1W9 429 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 CNOT3O75175 753 aaKnown RBP16.74■□□□□ 0.27
SMC4-211ENST00000469858 ALOX12BO75342 701 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 ONECUT2O95948 504 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 THY1P04216 161 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 HTR2AP28223 471 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 CDK5R2Q13319 367 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 EBPQ15125 230 aaKnown RBP16.74■□□□□ 0.27
SMC4-211ENST00000469858 RBM48Q5RL73 367 aaKnown RBP16.74■□□□□ 0.27
SMC4-211ENST00000469858 LAIR2Q6ISS4 152 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 ZNF730Q6ZMV8 503 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 ANKRD37Q7Z713 158 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 ZER1Q7Z7L7 766 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 NKAIN4Q8IVV8 208 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 LINC00471Q8N535 108 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 OR4C3Q8NH37 302 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 FBLIM1Q8WUP2 373 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 METTL21AQ8WXB1 218 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 UBE2FQ969M7 185 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 DGCR6LQ9BY27 220 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 ANKRD19PQ9H560 264 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 RASSF1Q9NS23 344 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 SLC7A7Q9UM01 511 aa16.74■□□□□ 0.27
SMC4-211ENST00000469858 A0A087WXM4 84 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 CDC14CA4D256 554 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 VSTM2BA6NLU5 285 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 SOX14O95416 240 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 DRD5P21918 477 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 MMP11P24347 488 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 CHMP24386 653 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 CRHBPP24387 322 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 EEF1B2P24534 225 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 POU1F1P28069 291 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 GGT2P36268 569 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 RPL5P46777 297 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 IDH2P48735 452 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 EMP2P54851 167 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 PSMD4P55036 377 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 NUP107P57740 925 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 SPEM2Q0P670 501 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 FGFBP1Q14512 234 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 HLA-DQA1Q5Y7H0 255 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 SLC29A4Q7RTT9 530 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 SATL1Q86VE3 508 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 AMER2Q8N7J2 671 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 FAM81AQ8TBF8 368 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 SPSB2Q99619 263 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 POLR2J3Q9H1A7 115 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 FBXO8Q9NRD0 319 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 REV1Q9UBZ9 1251 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 TESQ9UGI8 421 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 ANGPTL1O95841 491 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 OSMP13725 252 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 FMO3P31513 532 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 CCKBRP32239 447 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 CRISP1P54107 249 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 ESRRGP62508 458 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 MAD2L1BPQ15013 274 aaPredicted RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 PTGES3Q15185 160 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 OR1Q1Q15612 314 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 RRM2BQ7LG56 351 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 MEX3DQ86XN8 651 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 PRR22Q8IZ63 422 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 CMKLR1Q99788 373 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 CRB3Q9BUF7 120 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 ULBP3Q9BZM4 244 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 WWTR1Q9GZV5 400 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 TMEM9BQ9NQ34 198 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 DNAJB12Q9NXW2 375 aaKnown RBP16.73■□□□□ 0.27
SMC4-211ENST00000469858 SLC39A1Q9NY26 324 aa16.73■□□□□ 0.27
SMC4-211ENST00000469858 TRAPPC13A5PLN9 417 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 SLC1A7O00341 560 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 ITIH1P19827 911 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 PTNP21246 168 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 SLC5A2P31639 672 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 HLCSP50747 726 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 NR0B1P51843 470 aaKnown RBP16.72■□□□□ 0.27
SMC4-211ENST00000469858 TUBA4AP68366 448 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 TMEM236Q5W0B7 351 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 C1orf94Q6P1W5 598 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 FAM199XQ6PEV8 388 aaPredicted RBP16.72■□□□□ 0.27
SMC4-211ENST00000469858 LSRQ86X29 649 aaPredicted RBP16.72■□□□□ 0.27
SMC4-211ENST00000469858 ENTHD1Q8IYW4 607 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 SUMF1Q8NBK3 374 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 BPIFB6Q8NFQ5 453 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 RNF217Q8TC41 542 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 TMEM255BQ8WV15 326 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms