RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 GNRHR2Q96P88 292 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 VKORC1Q9BQB6 163 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 HOXD1Q9GZZ0 328 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 DEFB127Q9H1M4 99 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 TPT1P8Q9HAU6 139 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 FBXO34Q9NWN3 711 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 THUMPD1Q9NXG2 353 aaKnown RBP7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 CCDC167Q9P0B6 97 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 PPP4R1LQ9P1A2 415 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 LIPT1Q9Y234 373 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 MEMO1Q9Y316 297 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 UNC79Q9P2D8 2635 aa7.54□□□□□ -1.2
TRAPPC3-206ENST00000469757 SPTBN1Q01082 2364 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 A0A087WZY1 265 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CENPVL1A0A0U1RR11 272 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 FIGNL2A6NMB9 653 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 BBIP1A8MTZ0 92 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 LINC01387J3KSC0 135 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 SCDO00767 359 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 PRRG2O14669 202 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 GNB5O14775 395 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 NDUFB5O43674 189 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ZIC3O60481 467 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 WDR1O75083 606 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 TNFRSF21O75509 655 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 UGT2B17O75795 530 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CPSF4O95639 269 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ACTL6AO96019 429 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 GSNP06396 782 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 HOXD4P09016 255 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 OR12D1P0DN82 309 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CD1EP15812 388 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 AGAP20933 346 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 PPIBP23284 216 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CHMP24386 653 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 DPP4P27487 766 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 MSX1P28360 303 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 LSP1P33241 339 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 RFX3P48380 749 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CLK3P49761 638 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ARFIP2P53365 341 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CASP6P55212 293 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 DLX5P56178 289 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ZNF117Q03924 483 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 SKP2Q13309 424 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 MAPK11Q15759 364 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ZNF630Q2M218 657 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 AGKQ53H12 422 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 COX20Q5RI15 118 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 C6orf10Q5SRN2 563 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 DCST1Q5T197 706 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ATAD3BQ5T9A4 648 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 PRAMEF8Q5VWM4 474 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 C1QL3Q5VWW1 255 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 PRAMEF7Q5VXH5 474 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 TYW3Q6IPR3 259 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 SLC2A7Q6PXP3 512 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 DLEU7Q6UYE1 221 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 C16orf62Q7Z3J2 963 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ADGRE4PQ86SQ3 457 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 GALNT10Q86SR1 603 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 MARCH3Q86UD3 253 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 RETREG3Q86VR2 466 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 IFNEQ86WN2 208 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ZGRF1Q86YA3 2104 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 PM20D2Q8IYS1 436 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 MARVELD2Q8N4S9 558 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 OR4K17Q8NGC6 315 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ROPN1LQ96C74 230 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 AURKBQ96GD4 344 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CCDC120Q96HB5 630 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 CPPED1Q9BRF8 314 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 SLC38A1Q9H2H9 487 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 TP63Q9H3D4 680 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 RAD21L1Q9H4I0 556 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 A4GALTQ9NPC4 353 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 SAR1AQ9NR31 198 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 FAM53CQ9NYF3 392 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 TAS2R10Q9NYW0 307 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 P2RX2Q9UBL9 471 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 SUCOQ9UBS9 1254 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 KCNE5Q9UJ90 142 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 LEF1Q9UJU2 399 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 ICAM5Q9UMF0 924 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 L3MBTL1Q9Y468 752 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 WDR45Q9Y484 360 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 DTNAQ9Y4J8 743 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 FAM215AQ9Y5M1 114 aa7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 FLNBO75369 2602 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 SETXQ7Z333 2677 aaKnown RBP7.53□□□□□ -1.2
TRAPPC3-206ENST00000469757 TRGV8A0A0C4DH27 118 aa7.52□□□□□ -1.21
TRAPPC3-206ENST00000469757 C2orf72A6NCS6 295 aa7.52□□□□□ -1.21
TRAPPC3-206ENST00000469757 AGAP5A6NIR3 686 aa7.52□□□□□ -1.21
TRAPPC3-206ENST00000469757 H3BNH8 94 aa7.52□□□□□ -1.21
TRAPPC3-206ENST00000469757 FXYD1O00168 92 aa7.52□□□□□ -1.21
TRAPPC3-206ENST00000469757 LRRTM2O43300 516 aa7.52□□□□□ -1.21
TRAPPC3-206ENST00000469757 EIF4E2O60573 245 aaKnown RBP7.52□□□□□ -1.21
TRAPPC3-206ENST00000469757 FCMRO60667 390 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms