RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 UGT3A2Q3SY77 523 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 GALNTL6Q49A17 601 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 ZNF550Q7Z398 422 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 SZRD1Q7Z422 152 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 CDRT4Q8N9R6 151 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 OR2W6PQ8NHA6 318 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 CEP70Q8NHQ1 597 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 SMR3AQ99954 134 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 PPCSQ9HAB8 311 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 NEUROD4Q9HD90 331 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 PRR14LQ5THK1 2151 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 DSCAMO60469 2012 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 TRIM13O60858 407 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 KCNK2O95069 426 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 OPN1LWP04000 364 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 CD8BP10966 210 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 NEFHP12036 1026 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 BCKDHAP12694 445 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 FOSL1P15407 271 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 EXOSC6Q5RKV6 272 aaKnown RBP21.98■■□□□ 1.11
PTCH1-210ENST00000468211 MFSD12Q6NUT3 480 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 ZFP28Q8NHY6 868 aa21.98■■□□□ 1.11
PTCH1-210ENST00000468211 ZBED6CLQ96FA7 236 aaPredicted RBP21.98■■□□□ 1.11
PTCH1-210ENST00000468211 SIRT3Q9NTG7 399 aaPredicted RBP21.98■■□□□ 1.11
PTCH1-210ENST00000468211 BEX4Q9NWD9 120 aaPredicted RBP21.98■■□□□ 1.11
PTCH1-210ENST00000468211 EIF1AYO14602 144 aaKnown RBP21.97■■□□□ 1.11
PTCH1-210ENST00000468211 NDUFB5O43674 189 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 TBXA2RP21731 343 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 CRYGSP22914 178 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 ALDH3A1P30838 453 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 RPS3AP61247 264 aaKnown RBP21.97■■□□□ 1.11
PTCH1-210ENST00000468211 SGCBQ16585 318 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.97■■□□□ 1.11
PTCH1-210ENST00000468211 VPS26BQ4G0F5 336 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 CCNJQ5T5M9 372 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 NUDT8Q8WV74 236 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 PIK3IP1Q96FE7 263 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 MARK4Q96L34 752 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 MS4A4EQ96PG1 132 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 HS3ST6Q96QI5 342 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 TRMOQ9BU70 441 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 MED18Q9BUE0 208 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 MECRQ9BV79 373 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 ACSS1Q9NUB1 689 aaPredicted RBP21.97■■□□□ 1.11
PTCH1-210ENST00000468211 ELOVL5Q9NYP7 299 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 CLEC4AQ9UMR7 237 aa21.97■■□□□ 1.11
PTCH1-210ENST00000468211 ROS1P08922 2347 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 NGFRP08138 427 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 PSMA4P25789 261 aaKnown RBP21.96■■□□□ 1.11
PTCH1-210ENST00000468211 EIF1AXP47813 144 aaKnown RBP21.96■■□□□ 1.11
PTCH1-210ENST00000468211 KCNJ5P48544 419 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 CTU2Q2VPK5 515 aaKnown RBP21.96■■□□□ 1.11
PTCH1-210ENST00000468211 ANKRD34AQ69YU3 496 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 FAM214BQ7L5A3 538 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 DDIASQ8IXT1 998 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 BANPQ8N9N5 519 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 TWIST2Q8WVJ9 160 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 ZC3HAV1LQ96H79 300 aaKnown RBP21.96■■□□□ 1.11
PTCH1-210ENST00000468211 ADGRG7Q96K78 797 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 SLC39A3Q9BRY0 314 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 SLC17A7Q9P2U7 560 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 MID2Q9UJV3 735 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 PROCRQ9UNN8 238 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 TRAF6Q9Y4K3 522 aa21.96■■□□□ 1.11
PTCH1-210ENST00000468211 TLDC2A0PJX2 215 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 C16orf97H3BN30 126 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 PIP5K1BO14986 540 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 FGF4P08620 206 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 ZNF17P17021 662 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 LOXP28300 417 aaPredicted RBP21.95■■□□□ 1.1
PTCH1-210ENST00000468211 NKX6-1P78426 367 aaPredicted RBP21.95■■□□□ 1.1
PTCH1-210ENST00000468211 OCRLQ01968 901 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 CD226Q15762 336 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 ARL13AQ5H913 290 aaPredicted RBP21.95■■□□□ 1.1
PTCH1-210ENST00000468211 PPP4R4Q6NUP7 873 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 GTPBP8Q8N3Z3 284 aaPredicted RBP21.95■■□□□ 1.1
PTCH1-210ENST00000468211 OR10D3Q8NH80 312 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 POC1BQ8TC44 478 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 FAM120BQ96EK7 910 aaKnown RBP21.95■■□□□ 1.1
PTCH1-210ENST00000468211 SH3YL1Q96HL8 342 aaPredicted RBP21.95■■□□□ 1.1
PTCH1-210ENST00000468211 APOPT1Q96IL0 206 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 MKS1Q9NXB0 559 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 ZNF226Q9NYT6 803 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 TMED5Q9Y3A6 229 aa21.95■■□□□ 1.1
PTCH1-210ENST00000468211 A0A1W2PRB8 838 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 CHEK2O96017 543 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 ALOX5P09917 674 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 ARRB2P32121 409 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 EXOC3L2Q2M3D2 409 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 PLPPR5Q32ZL2 321 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 ZCCHC23Q6ZST2 131 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 Q71RC1 249 aaPredicted RBP21.94■■□□□ 1.1
PTCH1-210ENST00000468211 TRABD2AQ86V40 505 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 OR7A2PQ8NGA2 310 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 OR6Y1Q8NGX8 325 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 AGR3Q8TD06 166 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 MTERF3Q96E29 417 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 RNF145Q96MT1 663 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 TMEM185BQ9H7F4 350 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 MED17Q9NVC6 651 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms