RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 HOXB9P17482 250 aaPredicted RBP10.6□□□□□ -0.71
CUX1-207ENST00000465461 LSP1P33241 339 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 STARP49675 285 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 ATP12AP54707 1039 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 CHRNEQ04844 493 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 C4orf17Q53FE4 359 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 DCST1Q5T197 706 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 PDZK1Q5T2W1 519 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 METTL21CQ5VZV1 264 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 TYW3Q6IPR3 259 aaKnown RBP10.6□□□□□ -0.71
CUX1-207ENST00000465461 ZNF585AQ6P3V2 769 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 Q6ZPB1 254 aaPredicted RBP10.6□□□□□ -0.71
CUX1-207ENST00000465461 LSRQ86X29 649 aaPredicted RBP10.6□□□□□ -0.71
CUX1-207ENST00000465461 C10orf111Q8N326 155 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 FADS6Q8N9I5 356 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 PHOSPHO1Q8TCT1 267 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 NPAS1Q99742 590 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 SAR1AQ9NR31 198 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 SDHAF3Q9NRP4 125 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 EXD2Q9NVH0 621 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 QPCTLQ9NXS2 382 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 TAS2R10Q9NYW0 307 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 VAPAQ9P0L0 249 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 DKKL1Q9UK85 242 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 ACAD8Q9UKU7 415 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 A0A096LPI6 279 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 CLEC18AA5D8T8 446 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 KDM4EB2RXH2 506 aaPredicted RBP10.59□□□□□ -0.71
CUX1-207ENST00000465461 CLIC1O00299 241 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 FBP2O00757 339 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 PRRG2O14669 202 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 SUSD5O60279 629 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 ZIC3O60481 467 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 HCN1O60741 890 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 TNFRSF21O75509 655 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 STX11O75558 287 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 UGT2B17O75795 530 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 H6PDO95479 791 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 CHRM4P08173 479 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 BMP7P18075 431 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 HK1P19367 917 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 DRD4P21917 467 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 DPP4P27487 766 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 SRD5A2P31213 254 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 C17orf67Q0P5P2 114 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 KLF10Q13118 480 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 MAPK11Q15759 364 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 MAPK14Q16539 360 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 KLHL26Q53HC5 615 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 RPS26P11Q5JNZ5 115 aaPredicted RBP10.59□□□□□ -0.71
CUX1-207ENST00000465461 ATAD3BQ5T9A4 648 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 CBLN3Q6UW01 205 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 ARSKQ6UWY0 536 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 PLXDC2Q6UX71 529 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 CLEC18BQ6UXF7 455 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 FRRS1Q6ZNA5 592 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 CLEC18CQ8NCF0 446 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 RELTQ969Z4 430 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 TIMP4Q99727 224 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 UGT2B28Q9BY64 529 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 NMUR2Q9GZQ4 415 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 ZNF350Q9GZX5 532 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 IKZF5Q9H5V7 419 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 RUBCNLQ9H714 662 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 VDAC3Q9Y277 283 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 NDUFAF1Q9Y375 327 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 WDR45Q9Y484 360 aa10.59□□□□□ -0.71
CUX1-207ENST00000465461 DNAJC13O75165 2243 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 MED12Q93074 2177 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 LOC100653049A0A140TA62 436 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 A0A1B0GUH1 482 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 GMNCA6NCL1 334 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 CLDN24A6NM45 220 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 NPIPB9F8W1W9 429 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 ANGPT2O15123 496 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 ZG16O60844 167 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 BCAS1O75363 584 aaPredicted RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 KRT34O76011 436 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 AK1P00568 194 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 LDLRP01130 860 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 BCHEP06276 602 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 NGFRP08138 427 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 SNRPB2P08579 225 aaKnown RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 NR2F1P10589 423 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 ESRRAP11474 423 aaPredicted RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 CASP6P55212 293 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 DSCR4P56555 118 aaPredicted RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 B3GALT5-AS1P59052 145 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 DSTNP60981 165 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 ZNF117Q03924 483 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 SRYQ05066 204 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 CRYZQ08257 329 aaKnown RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 SELPLGQ14242 412 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 CAPRIN1Q14444 709 aaKnown RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 RGNQ15493 299 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 LRIF1Q5T3J3 769 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 DLEU7Q6UYE1 221 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 SPATA21Q7Z572 469 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 MARVELD2Q8N4S9 558 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms