RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GPAT3Q53EU6 434 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 INTS11Q5TA45 600 aaKnown RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 SLC22A10Q63ZE4 541 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 SLC25A25Q6KCM7 469 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 HEPHL1Q6MZM0 1159 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 NPSR1Q6W5P4 371 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 MSRB3Q8IXL7 192 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 C11orf65Q8NCR3 313 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 FAM13CQ8NE31 585 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 FBXO30Q8TB52 745 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 AURKBQ96GD4 344 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 SPATA5L1Q9BVQ7 753 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 TMEM38AQ9H6F2 299 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 ARMC7Q9H6L4 198 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 LIN28AQ9H9Z2 209 aaKnown RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 A4GALTQ9NPC4 353 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 SLC6A13Q9NSD5 602 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 SACM1LQ9NTJ5 587 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 ABCG2Q9UNQ0 655 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 KLF13Q9Y2Y9 288 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 PKDREJQ9NTG1 2253 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 ANKRD33BA6NCL7 494 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 B2RBV5 119 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 KLRC4-KLRK1H3BQV0 150 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 C19orf84I3L1E1 186 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 GMNNO75496 209 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 OR6B1O95007 311 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 CLDN14O95500 239 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 PSME3P61289 254 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 CAPRIN1Q14444 709 aaKnown RBP15.97■□□□□ 0.15
CPSF4-209ENST00000465132 ZSWIM7Q19AV6 140 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 GTDC1Q4AE62 458 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 ZNF468Q5VIY5 522 aaPredicted RBP15.97■□□□□ 0.15
CPSF4-209ENST00000465132 TMEM81Q6P7N7 255 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 LRRC74BQ6ZQY2 392 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 KRT73Q86Y46 540 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 PGAM4Q8N0Y7 254 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 OR5D16Q8NGK9 328 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 FAM110BQ8TC76 370 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 PIK3R3Q92569 461 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 ADOQ96SZ5 270 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 KAT8Q9H7Z6 458 aaKnown RBP15.97■□□□□ 0.15
CPSF4-209ENST00000465132 UBQLN4Q9NRR5 601 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 ANGPT4Q9Y264 503 aa15.97■□□□□ 0.15
CPSF4-209ENST00000465132 A0A0G2JPF8 293 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 HNRNPCL2B2RXH8 293 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 HNRNPCL3B7ZW38 293 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 FXYD1O00168 92 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 SCDO00767 359 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 NME2P1O60361 137 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 TSPAN2O60636 221 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 SLC25A12O75746 678 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 PDE9AO76083 593 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 SNX4O95219 450 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 NGFRP08138 427 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 HNRNPCL4P0DMR1 293 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 ETFAP13804 333 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 NME2P22392 152 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 RFX3P48380 749 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 MVDP53602 400 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 MTPNP58546 118 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 DNAL1Q4LDG9 190 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 FLYWCH1Q4VC44 716 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 SAMD4BQ5PRF9 694 aaKnown RBP15.96■□□□□ 0.15
CPSF4-209ENST00000465132 AP1ARQ63HQ0 302 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 REEP3Q6NUK4 255 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 SLC30A6Q6NXT4 461 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 CCDC121Q6ZUS5 278 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 NCCRP1Q6ZVX7 275 aaPredicted RBP15.96■□□□□ 0.15
CPSF4-209ENST00000465132 WDR53Q7Z5U6 358 aaPredicted RBP15.96■□□□□ 0.15
CPSF4-209ENST00000465132 CHERPQ8IWX8 916 aaKnown RBP15.96■□□□□ 0.15
CPSF4-209ENST00000465132 GHDCQ8N2G8 530 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 BBS10Q8TAM1 723 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 PAQR8Q8TEZ7 354 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 ZNF607Q96SK3 696 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 SDF2Q99470 211 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 GPATCH1Q9BRR8 931 aaKnown RBP15.96■□□□□ 0.15
CPSF4-209ENST00000465132 METTL7AQ9H8H3 244 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 MTHFD2LQ9H903 347 aaPredicted RBP15.96■□□□□ 0.15
CPSF4-209ENST00000465132 ZNF232Q9UNY5 417 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 WDR45Q9Y484 360 aa15.96■□□□□ 0.15
CPSF4-209ENST00000465132 NCOA6Q14686 2063 aaPredicted RBP15.96■□□□□ 0.15
CPSF4-209ENST00000465132 CSMD2Q7Z408 3487 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 EXPH5Q8NEV8 1989 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 ZNHIT1O43257 154 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 TNFRSF21O75509 655 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 IFNA14P01570 189 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 CD1EP15812 388 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 ABOP16442 354 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 ZNF24P17028 368 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 SSTR2P30874 369 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 CPA2P48052 419 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 EEFSECP57772 596 aaKnown RBP15.95■□□□□ 0.14
CPSF4-209ENST00000465132 HSF1Q00613 529 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 RNFT1Q5M7Z0 435 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 COX20Q5RI15 118 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 C16orf47Q6ZP98 133 aaPredicted RBP15.95■□□□□ 0.14
CPSF4-209ENST00000465132 PACS2Q86VP3 889 aa15.95■□□□□ 0.14
CPSF4-209ENST00000465132 ZNF227Q86WZ6 799 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms