RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SQLEQ14534 574 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 MAPK11Q15759 364 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 PAGE3Q5JUK9 113 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 METTL21CQ5VZV1 264 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 TNFAIP8L2Q6P589 184 aaPredicted RBP16.06■□□□□ 0.16
VPS52-214ENST00000463486 MSRB3Q8IXL7 192 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 TRIML2Q8N7C3 387 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 SARAFQ96BY9 339 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 ITCHQ96J02 903 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 TMEM120AQ9BXJ8 343 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 UGT2B28Q9BY64 529 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 TBL1XR1Q9BZK7 514 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 ZNF350Q9GZX5 532 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 SAP130Q9H0E3 1048 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 SDHAF3Q9NRP4 125 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 CCDC167Q9P0B6 97 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 SLAMF8Q9P0V8 285 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 PPP4R1LQ9P1A2 415 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 FAM215AQ9Y5M1 114 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 UNC79Q9P2D8 2635 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 CENPVL1A0A0U1RR11 272 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 OIP5O43482 229 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 DPP4P27487 766 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 CHI3L1P36222 383 aaPredicted RBP16.05■□□□□ 0.16
VPS52-214ENST00000463486 DCTP40126 519 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 CLK3P49761 638 aaKnown RBP16.05■□□□□ 0.16
VPS52-214ENST00000463486 ATP12AP54707 1039 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 CASP6P55212 293 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 DSCR4P56555 118 aaPredicted RBP16.05■□□□□ 0.16
VPS52-214ENST00000463486 CDSNQ15517 529 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 TMEM44Q2T9K0 475 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 AGKQ53H12 422 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 LRIF1Q5T3J3 769 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
VPS52-214ENST00000463486 PHF10Q8WUB8 498 aaKnown RBP16.05■□□□□ 0.16
VPS52-214ENST00000463486 XAGE5Q8WWM1 108 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 ITLN2Q8WWU7 325 aaPredicted RBP16.05■□□□□ 0.16
VPS52-214ENST00000463486 ZG16BQ96DA0 208 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 SPDL1Q96EA4 605 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 C1GALT1C1Q96EU7 318 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 NMUR2Q9GZQ4 415 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 PRDM14Q9GZV8 571 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 HOXD1Q9GZZ0 328 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 TP63Q9H3D4 680 aaPredicted RBP16.05■□□□□ 0.16
VPS52-214ENST00000463486 RMND5AQ9H871 391 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 TAS2R10Q9NYW0 307 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 SLC25A37Q9NYZ2 338 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 ACAD8Q9UKU7 415 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 PCDHB14Q9Y5E9 798 aa16.05■□□□□ 0.16
VPS52-214ENST00000463486 TRBV5-3A0A0A0MS03 114 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 C15orf38-AP3S2A0A0A6YYH1 394 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 NDUFB5O43674 189 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 CLDN1O95832 211 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 AGR2O95994 175 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 AK1P00568 194 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 VIMP08670 466 aaKnown RBP16.04■□□□□ 0.16
VPS52-214ENST00000463486 NCF2P19878 526 aaPredicted RBP16.04■□□□□ 0.16
VPS52-214ENST00000463486 PER3P56645 1201 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 TOMM20Q15388 145 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 ZNF141Q15928 474 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 MAPK14Q16539 360 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 FLYWCH1Q4VC44 716 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 TYW3Q6IPR3 259 aaKnown RBP16.04■□□□□ 0.16
VPS52-214ENST00000463486 ULK2Q8IYT8 1036 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 OR4K17Q8NGC6 315 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 PNPT1Q8TCS8 783 aaKnown RBP16.04■□□□□ 0.16
VPS52-214ENST00000463486 ROPN1LQ96C74 230 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 AURKBQ96GD4 344 aaPredicted RBP16.04■□□□□ 0.16
VPS52-214ENST00000463486 WDYHV1Q96HA8 205 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 EXO5Q9H790 373 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 TPT1P8Q9HAU6 139 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 EXD2Q9NVH0 621 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 MKLN1Q9UL63 735 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 GMEB1Q9Y692 573 aa16.04■□□□□ 0.16
VPS52-214ENST00000463486 A0A096LPI6 279 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 A0A1W2PP18 115 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 KDM4EB2RXH2 506 aaPredicted RBP16.03■□□□□ 0.16
VPS52-214ENST00000463486 SCDO00767 359 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 KIAA0513O60268 411 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 STX11O75558 287 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 UGT2B17O75795 530 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 ACTL6AO96019 429 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 ATP6V1C1P21283 382 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 ACVR2AP27037 513 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 MAGEA8P43361 318 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 KHKP50053 298 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 LHX2P50458 406 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 RNF144AP50876 292 aaPredicted RBP16.03■□□□□ 0.16
VPS52-214ENST00000463486 TXNL4AP83876 142 aaKnown RBP16.03■□□□□ 0.16
VPS52-214ENST00000463486 WLSQ5T9L3 541 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 ZNF585AQ6P3V2 769 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 MTFR2Q6P444 385 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 CBLN3Q6UW01 205 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 ARSKQ6UWY0 536 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 DLEU7Q6UYE1 221 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 FRRS1Q6ZNA5 592 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 SEM1Q6ZVN7 128 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 ANKFN1Q8N957 763 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 GATSQ8NAP1 163 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 OR14L1PQ8NHC6 308 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms