RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SLMAPQ14BN4 828 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 MORF4L2Q15014 288 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 SGCBQ16585 318 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 ZNF239Q16600 458 aaKnown RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 CPSF6Q16630 551 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMC3-202ENST00000462899 PDLIM3Q53GG5 364 aaPredicted RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 AGAP6Q5VW22 663 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 APOOLQ6UXV4 268 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 C12orf54Q6X4T0 127 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 B3GLCTQ6Y288 498 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 NUFIP2Q7Z417 695 aaKnown RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 COMMD6Q7Z4G1 85 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 TBC1D1Q86TI0 1168 aaPredicted RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 STK32CQ86UX6 486 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 PDIK1LQ8N165 341 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 ZNF619Q8N2I2 560 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 GTPBP8Q8N3Z3 284 aaPredicted RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 TEX9Q8N6V9 391 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 BANPQ8N9N5 519 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 TRIM58Q8NG06 486 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 SGMS2Q8NHU3 365 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 UHMK1Q8TAS1 419 aaKnown RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 STAG3L4Q8TBR4 150 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 GRK7Q8WTQ7 553 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 ZFAND2BQ8WV99 257 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 KLHL29Q96CT2 875 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 SERPINI1Q99574 410 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 RBBP8Q99708 897 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 C12orf49Q9H741 205 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 FAM120CQ9NX05 1096 aaKnown RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 NSMCE4AQ9NXX6 385 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 KLHL13Q9P2N7 655 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 DCTN4Q9UJW0 460 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 ING1Q9UK53 422 aaPredicted RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 MCTS1Q9ULC4 181 aaKnown RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 RNF11Q9Y3C5 154 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 IGHV4-61A0A0C4DH41 118 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 LOC100289279A0A1B0GTE1 492 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 SUPT3HB4E1H0 165 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 OR7A17O14581 309 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 ABCD4O14678 606 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 TNFSF11O14788 317 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 CXCL13O43927 109 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 PLOD3O60568 738 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 SUPT3HO75486 399 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 BCAS2O75934 225 aaPredicted RBP6.8□□□□□ -1.32
SMC3-202ENST00000462899 LY6HO94772 140 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 PGM3O95394 542 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 ADAP00813 363 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 S100BP04271 92 aaPredicted RBP6.8□□□□□ -1.32
SMC3-202ENST00000462899 FESP07332 822 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 STMN1P16949 149 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 HNF1AP20823 631 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 IL32P24001 234 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 EDNRAP25101 427 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 NR4A2P43354 598 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 PIK3CGP48736 1102 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 RAB10P61026 200 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 SPOCK1Q08629 439 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 ITGADQ13349 1161 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 Q6ZSR9 355 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 Q6ZT83 130 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 ESPNLQ6ZVH7 1005 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 GOLGA7Q7Z5G4 137 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 MYLK4Q86YV6 388 aaPredicted RBP6.8□□□□□ -1.32
SMC3-202ENST00000462899 CENPLQ8N0S6 344 aaPredicted RBP6.8□□□□□ -1.32
SMC3-202ENST00000462899 MUC15Q8N387 334 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 FBXO36Q8NEA4 188 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 OR7G2Q8NG99 324 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 OR9A2Q8NGT5 310 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 OR2V1Q8NHB1 315 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 RHEBL1Q8TAI7 183 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 POC1BQ8TC44 478 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 DUSP19Q8WTR2 217 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 ABHD3Q8WU67 409 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 KISS1RQ969F8 398 aaPredicted RBP6.8□□□□□ -1.32
SMC3-202ENST00000462899 NXNL1Q96CM4 212 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 TSPAN17Q96FV3 270 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 NAP1L3Q99457 506 aaPredicted RBP6.8□□□□□ -1.32
SMC3-202ENST00000462899 DHRS9Q9BPW9 319 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 KLHDC3Q9BQ90 382 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 SRXN1Q9BYN0 137 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 PTGES2Q9H7Z7 377 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 GP6Q9HCN6 339 aa6.8□□□□□ -1.32
SMC3-202ENST00000462899 RYR3Q15413 4870 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 SERINC4A6NH21 518 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 NDUFS8O00217 210 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 PGRMC1O00264 195 aaKnown RBP6.79□□□□□ -1.32
SMC3-202ENST00000462899 SMAD9O15198 467 aaKnown RBP6.79□□□□□ -1.32
SMC3-202ENST00000462899 VENTXO95231 258 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 IL33O95760 270 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 PROCP04070 461 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 COL6A2P12110 1019 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 SHC1P29353 583 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 KRT20P35900 424 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 EFNA4P52798 201 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 MAPK12P53778 367 aa6.79□□□□□ -1.32
SMC3-202ENST00000462899 SLC12A2P55011 1212 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms